Information for 7-GGCAGTTCCG (Motif 6)

A C T G T A C G A G T C T G C A A T C G A C G T A C G T A T G C G A T C T C A G
Reverse Opposite:
A G T C C T A G A T C G G T C A T G C A A T G C A C G T T C A G A T G C G T A C
p-value:1e-15
log p-value:-3.538e+01
Information Content per bp:1.691
Number of Target Sequences with motif66.0
Percentage of Target Sequences with motif8.18%
Number of Background Sequences with motif1165.5
Percentage of Background Sequences with motif2.56%
Average Position of motif in Targets46.3 +/- 21.9bp
Average Position of motif in Background51.5 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GGCAGTTCCG
GGCVGTTR--
 A C T G T A C G A G T C T G C A A T C G A C G T A C G T A T G C G A T C T C A G
C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GGCAGTTCCG
TKCTGTTCCA
 A C T G T A C G A G T C T G C A A T C G A C G T A C G T A T G C G A T C T C A G
A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:3
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GGCAGTTCCG
TGGCAGTTGG-
 A C G T A C T G T A C G A G T C T G C A A T C G A C G T A C G T A T G C G A T C T C A G
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T

Myb/MA0100.2/Jaspar

Match Rank:4
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GGCAGTTCCG
TGGCAGTTGN-
 A C G T A C T G T A C G A G T C T G C A A T C G A C G T A C G T A T G C G A T C T C A G
C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T

REL/MA0101.1/Jaspar

Match Rank:5
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GGCAGTTCCG
GGGGATTTCC-
 A C G T A C T G T A C G A G T C T G C A A T C G A C G T A C G T A T G C G A T C T C A G
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:6
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----GGCAGTTCCG--
NNNTGGCAGTTGGTNN
 A C G T A C G T A C G T A C G T A C T G T A C G A G T C T G C A A T C G A C G T A C G T A T G C G A T C T C A G A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GGCAGTTCCG--
--HACTTCCGGY
 A C T G T A C G A G T C T G C A A T C G A C G T A C G T A T G C G A T C T C A G A C G T A C G T
A C G T A C G T G A T C T C G A A G T C C G A T C G A T A G T C A T G C A C T G A T C G G A C T

Gabpa/MA0062.2/Jaspar

Match Rank:8
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GGCAGTTCCG-
NCCACTTCCGG
 A C T G T A C G A G T C T G C A A T C G A C G T A C G T A T G C G A T C T C A G A C G T
A C T G A G T C A G T C C T G A A G T C C A G T A C G T A G T C G T A C A C T G A T C G

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GGCAGTTCCG--
--NRYTTCCGGY
 A C T G T A C G A G T C T G C A A T C G A C G T A C G T A T G C G A T C T C A G A C G T A C G T
A C G T A C G T G A T C C T G A A G T C C G A T C G A T G A T C A G T C A C T G A T C G A G C T

RELA/MA0107.1/Jaspar

Match Rank:10
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GGCAGTTCCG
GGGAATTTCC-
 A C G T A C T G T A C G A G T C T G C A A T C G A C G T A C G T A T G C G A T C T C A G
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T