Information for 3-TGTCCTGGGA (Motif 3)

C A G T C A T G A G C T A G T C A G T C C G A T C A T G C T A G A T C G C T G A
Reverse Opposite:
G A C T T A G C G A T C G T A C C G T A C T A G T C A G C T G A G T A C G T C A
p-value:1e-22
log p-value:-5.247e+01
Information Content per bp:1.594
Number of Target Sequences with motif136.0
Percentage of Target Sequences with motif16.85%
Number of Background Sequences with motif3005.2
Percentage of Background Sequences with motif6.59%
Average Position of motif in Targets46.9 +/- 26.4bp
Average Position of motif in Background49.8 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TGTCCTGGGA
CTGTTCCTGG-
 A C G T C A G T C A T G A G C T A G T C A G T C C G A T C A T G C T A G A T C G C T G A
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TGTCCTGGGA
BNTGDCCTTG--
 A C G T A C G T C A G T C A T G A G C T A G T C A G T C C G A T C A T G C T A G A T C G C T G A
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TGTCCTGGGA
TGACCTTGAN
 C A G T C A T G A G C T A G T C A G T C C G A T C A T G C T A G A T C G C T G A
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGTCCTGGGA
TGACCTYA--
 C A G T C A T G A G C T A G T C A G T C C G A T C A T G C T A G A T C G C T G A
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:5
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGTCCTGGGA
TGACCTTGAV
 C A G T C A T G A G C T A G T C A G T C C G A T C A T G C T A G A T C G C T G A
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TGTCCTGGGA
CTGACCTTTG-
 A C G T C A G T C A T G A G C T A G T C A G T C C G A T C A T G C T A G A T C G C T G A
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TGTCCTGGGA
ATTTCCTGTN-
 A C G T C A G T C A T G A G C T A G T C A G T C C G A T C A T G C T A G A T C G C T G A
T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGTCCTGGGA
GTGACCTT---
 A C G T C A G T C A T G A G C T A G T C A G T C C G A T C A T G C T A G A T C G C T G A
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:9
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TGTCCTGGGA
NNAYTTCCTGHN-
 A C G T A C G T A C G T C A G T C A T G A G C T A G T C A G T C C G A T C A T G C T A G A T C G C T G A
A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:10
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TGTCCTGGGA---
--TTCTTGGAAAN
 C A G T C A T G A G C T A G T C A G T C C G A T C A T G C T A G A T C G C T G A A C G T A C G T A C G T
A C G T A C G T A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T