Information for 7-GCGGTTTCTAGGY (Motif 11)

A C T G A T G C C A T G A T C G A G C T A C G T A C G T A G T C C G A T C T G A A C T G A C T G A G C T
Reverse Opposite:
C T G A A G T C A G T C A G C T C G T A A C T G C G T A C G T A C T G A A T G C G T A C T A C G A G T C
p-value:1e-9
log p-value:-2.295e+01
Information Content per bp:1.833
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif19.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets53.1 +/- 26.7bp
Average Position of motif in Background54.0 +/- 17.8bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GCGGTTTCTAGGY
-CTGTTGCTAGGS
 A C T G A T G C C A T G A T C G A G C T A C G T A C G T A G T C C G A T C T G A A C T G A C T G A G C T
A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GCGGTTTCTAGGY----
--KGTTGCTAGGMAACA
 A C T G A T G C C A T G A T C G A G C T A C G T A C G T A G T C C G A T C T G A A C T G A C T G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A

Bcl6/MA0463.1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GCGGTTTCTAGGY--
-NGCTTTCTAGGAAN
 A C T G A T G C C A T G A T C G A G C T A C G T A C G T A G T C C G A T C T G A A C T G A C T G A G C T A C G T A C G T
A C G T C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GCGGTTTCTAGGY--
NCCGTTGCTANGNGN
 A C T G A T G C C A T G A T C G A G C T A C G T A C G T A G T C C G A T C T G A A C T G A C T G A G C T A C G T A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GCGGTTTCTAGGY--
BCNGGTTCTAGANCN
 A C T G A T G C C A T G A T C G A G C T A C G T A C G T A G T C C G A T C T G A A C T G A C T G A G C T A C G T A C G T
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

STAT1/MA0137.3/Jaspar

Match Rank:6
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GCGGTTTCTAGGY--
----TTTCCAGGAAA
 A C T G A T G C C A T G A T C G A G C T A C G T A C G T A G T C C G A T C T G A A C T G A C T G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GCGGTTTCTAGGY
-TGGTTTCAGT--
 A C T G A T G C C A T G A T C G A G C T A C G T A C G T A G T C C G A T C T G A A C T G A C T G A G C T
A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCGGTTTCTAGGY--
NNCGTTGCTATGGNN
 A C T G A T G C C A T G A T C G A G C T A C G T A C G T A G T C C G A T C T G A A C T G A C T G A G C T A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCGGTTTCTAGGY--
NNNCTTTCCAGGAAA
 A C T G A T G C C A T G A T C G A G C T A C G T A C G T A G T C C G A T C T G A A C T G A C T G A G C T A C G T A C G T
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A

PB0006.1_Bcl6b_1/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GCGGTTTCTAGGY-----
--TCTTTCGAGGAATTTG
 A C T G A T G C C A T G A T C G A G C T A C G T A C G T A G T C C G A T C T G A A C T G A C T G A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T G A T C G A C T C G A T C G A T A G T C A C T G C G T A T C A G C A T G C G T A G C T A G A C T G C A T G A C T T A C G