Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-25 | -5.895e+01 | 0.0000 | 39.0 | 5.76% | 264.9 | 0.57% | motif file (matrix) |
svg |
2 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-24 | -5.716e+01 | 0.0000 | 54.0 | 7.98% | 606.2 | 1.30% | motif file (matrix) |
svg |
3 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-22 | -5.200e+01 | 0.0000 | 75.0 | 11.08% | 1316.8 | 2.82% | motif file (matrix) |
svg |
4 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-21 | -5.020e+01 | 0.0000 | 83.0 | 12.26% | 1638.7 | 3.51% | motif file (matrix) |
svg |
5 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-19 | -4.545e+01 | 0.0000 | 80.0 | 11.82% | 1659.2 | 3.55% | motif file (matrix) |
svg |
6 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-19 | -4.386e+01 | 0.0000 | 90.0 | 13.29% | 2092.1 | 4.48% | motif file (matrix) |
svg |
7 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-18 | -4.319e+01 | 0.0000 | 79.0 | 11.67% | 1687.1 | 3.61% | motif file (matrix) |
svg |
8 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-18 | -4.252e+01 | 0.0000 | 41.0 | 6.06% | 475.2 | 1.02% | motif file (matrix) |
svg |
9 |
| HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer | 1e-13 | -3.171e+01 | 0.0000 | 72.0 | 10.64% | 1791.5 | 3.83% | motif file (matrix) |
svg |
10 |
| HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer | 1e-12 | -2.813e+01 | 0.0000 | 69.0 | 10.19% | 1804.7 | 3.86% | motif file (matrix) |
svg |
11 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-12 | -2.809e+01 | 0.0000 | 60.0 | 8.86% | 1436.2 | 3.07% | motif file (matrix) |
svg |
12 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-12 | -2.775e+01 | 0.0000 | 40.0 | 5.91% | 710.4 | 1.52% | motif file (matrix) |
svg |
13 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-10 | -2.415e+01 | 0.0000 | 59.0 | 8.71% | 1543.0 | 3.30% | motif file (matrix) |
svg |
14 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-9 | -2.249e+01 | 0.0000 | 64.0 | 9.45% | 1830.7 | 3.92% | motif file (matrix) |
svg |
15 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-9 | -2.235e+01 | 0.0000 | 53.0 | 7.83% | 1364.1 | 2.92% | motif file (matrix) |
svg |
16 |
| NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-9 | -2.203e+01 | 0.0000 | 118.0 | 17.43% | 4504.6 | 9.64% | motif file (matrix) |
svg |
17 |
| CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer | 1e-8 | -2.061e+01 | 0.0000 | 54.0 | 7.98% | 1478.9 | 3.16% | motif file (matrix) |
svg |
18 |
| Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer | 1e-8 | -1.848e+01 | 0.0000 | 45.0 | 6.65% | 1185.7 | 2.54% | motif file (matrix) |
svg |
19 |
| Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer | 1e-7 | -1.799e+01 | 0.0000 | 42.0 | 6.20% | 1080.5 | 2.31% | motif file (matrix) |
svg |
20 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-7 | -1.764e+01 | 0.0000 | 42.0 | 6.20% | 1094.1 | 2.34% | motif file (matrix) |
svg |
21 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-6 | -1.472e+01 | 0.0000 | 37.0 | 5.47% | 1004.6 | 2.15% | motif file (matrix) |
svg |
22 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-5 | -1.364e+01 | 0.0000 | 45.0 | 6.65% | 1412.8 | 3.02% | motif file (matrix) |
svg |
23 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-5 | -1.360e+01 | 0.0000 | 32.0 | 4.73% | 840.4 | 1.80% | motif file (matrix) |
svg |
24 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-5 | -1.277e+01 | 0.0000 | 32.0 | 4.73% | 875.5 | 1.87% | motif file (matrix) |
svg |
25 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-5 | -1.247e+01 | 0.0001 | 29.0 | 4.28% | 761.0 | 1.63% | motif file (matrix) |
svg |
26 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-5 | -1.196e+01 | 0.0001 | 46.0 | 6.79% | 1557.8 | 3.33% | motif file (matrix) |
svg |
27 |
| GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer | 1e-4 | -1.143e+01 | 0.0001 | 22.0 | 3.25% | 517.9 | 1.11% | motif file (matrix) |
svg |
28 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-4 | -1.141e+01 | 0.0001 | 49.0 | 7.24% | 1739.0 | 3.72% | motif file (matrix) |
svg |
29 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-4 | -1.084e+01 | 0.0002 | 62.0 | 9.16% | 2448.2 | 5.24% | motif file (matrix) |
svg |
30 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-4 | -1.008e+01 | 0.0005 | 33.0 | 4.87% | 1051.7 | 2.25% | motif file (matrix) |
svg |
31 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-4 | -9.851e+00 | 0.0006 | 84.0 | 12.41% | 3746.6 | 8.02% | motif file (matrix) |
svg |
32 |
| c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer | 1e-4 | -9.753e+00 | 0.0007 | 36.0 | 5.32% | 1212.1 | 2.59% | motif file (matrix) |
svg |
33 |
| NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer | 1e-4 | -9.647e+00 | 0.0007 | 59.0 | 8.71% | 2392.2 | 5.12% | motif file (matrix) |
svg |
34 |
| bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer | 1e-4 | -9.629e+00 | 0.0007 | 28.0 | 4.14% | 846.6 | 1.81% | motif file (matrix) |
svg |
35 |
| c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer | 1e-3 | -9.173e+00 | 0.0011 | 43.0 | 6.35% | 1597.5 | 3.42% | motif file (matrix) |
svg |
36 |
| Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer | 1e-3 | -8.477e+00 | 0.0021 | 61.0 | 9.01% | 2611.3 | 5.59% | motif file (matrix) |
svg |
37 |
| BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-3 | -8.148e+00 | 0.0028 | 80.0 | 11.82% | 3717.3 | 7.95% | motif file (matrix) |
svg |
38 |
| CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-3 | -8.100e+00 | 0.0029 | 36.0 | 5.32% | 1322.1 | 2.83% | motif file (matrix) |
svg |
39 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-3 | -8.099e+00 | 0.0029 | 20.0 | 2.95% | 565.3 | 1.21% | motif file (matrix) |
svg |
40 |
| Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer | 1e-3 | -8.050e+00 | 0.0029 | 38.0 | 5.61% | 1427.1 | 3.05% | motif file (matrix) |
svg |
41 |
| CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer | 1e-3 | -7.973e+00 | 0.0031 | 88.0 | 13.00% | 4203.9 | 8.99% | motif file (matrix) |
svg |
42 |
| NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer | 1e-3 | -7.129e+00 | 0.0069 | 72.0 | 10.64% | 3384.3 | 7.24% | motif file (matrix) |
svg |
43 |
| HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer | 1e-2 | -6.858e+00 | 0.0089 | 112.0 | 16.54% | 5806.3 | 12.42% | motif file (matrix) |
svg |
44 |
| Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer | 1e-2 | -6.781e+00 | 0.0094 | 39.0 | 5.76% | 1583.6 | 3.39% | motif file (matrix) |
svg |
45 |
| Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer | 1e-2 | -6.768e+00 | 0.0094 | 22.0 | 3.25% | 724.5 | 1.55% | motif file (matrix) |
svg |
46 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-2 | -6.555e+00 | 0.0113 | 38.0 | 5.61% | 1550.9 | 3.32% | motif file (matrix) |
svg |
47 |
| E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-2 | -6.252e+00 | 0.0149 | 77.0 | 11.37% | 3796.9 | 8.12% | motif file (matrix) |
svg |
48 |
| GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -6.216e+00 | 0.0151 | 6.0 | 0.89% | 88.1 | 0.19% | motif file (matrix) |
svg |
49 |
| Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer | 1e-2 | -6.074e+00 | 0.0171 | 24.0 | 3.55% | 865.8 | 1.85% | motif file (matrix) |
svg |
50 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.994e+00 | 0.0182 | 31.0 | 4.58% | 1229.5 | 2.63% | motif file (matrix) |
svg |
51 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-2 | -5.931e+00 | 0.0190 | 137.0 | 20.24% | 7532.3 | 16.12% | motif file (matrix) |
svg |
52 |
| EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.682e+00 | 0.0239 | 30.0 | 4.43% | 1203.9 | 2.58% | motif file (matrix) |
svg |
53 |
| Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer | 1e-2 | -5.604e+00 | 0.0253 | 29.0 | 4.28% | 1157.0 | 2.48% | motif file (matrix) |
svg |
54 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-2 | -5.367e+00 | 0.0315 | 39.0 | 5.76% | 1721.7 | 3.68% | motif file (matrix) |
svg |
55 |
| E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer | 1e-2 | -5.249e+00 | 0.0348 | 86.0 | 12.70% | 4498.1 | 9.62% | motif file (matrix) |
svg |
56 |
| Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer | 1e-2 | -5.244e+00 | 0.0348 | 24.0 | 3.55% | 926.8 | 1.98% | motif file (matrix) |
svg |
57 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-2 | -5.160e+00 | 0.0367 | 69.0 | 10.19% | 3486.1 | 7.46% | motif file (matrix) |
svg |
58 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-2 | -4.846e+00 | 0.0493 | 38.0 | 5.61% | 1723.7 | 3.69% | motif file (matrix) |
svg |
59 |
| CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-2 | -4.638e+00 | 0.0597 | 27.0 | 3.99% | 1137.1 | 2.43% | motif file (matrix) |
svg |