Information for 2-GGATTTATKAGGCTGA (Motif 5)

A C T G T A C G G C T A A C G T A C G T A C G T G C T A C G A T A C G T C T G A C A T G A C T G G T A C C G A T A C T G C G T A
Reverse Opposite:
C G A T G T A C C G T A A C T G T A G C G T A C G A C T G T C A C G T A C A G T C G T A G T C A G T C A C A G T A G T C G T A C
p-value:1e-14
log p-value:-3.348e+01
Information Content per bp:1.721
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.8 +/- 26.7bp
Average Position of motif in Background75.6 +/- 15.5bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GGATTTATKAGGCTGA
--TTTTATKRGG----
 A C T G T A C G G C T A A C G T A C G T A C G T G C T A C G A T A C G T C T G A C A T G A C T G G T A C C G A T A C T G C G T A
A C G T A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T A C G T A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGATTTATKAGGCTGA
-NTTTTATTGG-----
 A C T G T A C G G C T A A C G T A C G T A C G T G C T A C G A T A C G T C T G A C A T G A C T G G T A C C G A T A C T G C G T A
A C G T C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGATTTATKAGGCTGA
-TTTTTATTGG-----
 A C T G T A C G G C T A A C G T A C G T A C G T G C T A C G A T A C G T C T G A C A T G A C T G G T A C C G A T A C T G C G T A
A C G T C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T A C G T A C G T A C G T A C G T

Hoxa9/MA0594.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGATTTATKAGGCTGA
TGATTTATGGC-----
 A C T G T A C G G C T A A C G T A C G T A C G T G C T A C G A T A C G T C T G A C A T G A C T G G T A C C G A T A C T G C G T A
C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C A C G T A C G T A C G T A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GGATTTATKAGGCTGA
-NTTTTATTGG-----
 A C T G T A C G G C T A A C G T A C G T A C G T G C T A C G A T A C G T C T G A C A T G A C T G G T A C C G A T A C T G C G T A
A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGATTTATKAGGCTGA
DGWTTTATGRCN----
 A C T G T A C G G C T A A C G T A C G T A C G T G C T A C G A T A C G T C T G A C A T G A C T G G T A C C G A T A C T G C G T A
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C A C G T A C G T A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GGATTTATKAGGCTGA
--TTTTATTRGN----
 A C T G T A C G G C T A A C G T A C G T A C G T G C T A C G A T A C G T C T G A C A T G A C T G G T A C C G A T A C T G C G T A
A C G T A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A A C G T A C G T A C G T A C G T

Hoxc9/MA0485.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGATTTATKAGGCTGA
NTGATTTATGGCC----
 A C G T A C T G T A C G G C T A A C G T A C G T A C G T G C T A C G A T A C G T C T G A C A T G A C T G G T A C C G A T A C T G C G T A
T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C A C G T A C G T A C G T A C G T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGATTTATKAGGCTGA
TGATTTATGGCC----
 A C T G T A C G G C T A A C G T A C G T A C G T G C T A C G A T A C G T C T G A C A T G A C T G G T A C C G A T A C T G C G T A
C G A T C T A G G C T A C G A T C A G T A C G T G T C A A G C T C A T G T C A G A G T C A G T C A C G T A C G T A C G T A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GGATTTATKAGGCTGA
NNAATTTTATTGGNTN--
 A C G T A C G T A C T G T A C G G C T A A C G T A C G T A C G T G C T A C G A T A C G T C T G A C A T G A C T G G T A C C G A T A C T G C G T A
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T A C G T A C G T