Information for 24-CAGTCCGCTGCGA (Motif 37)

A G T C C G T A A C T G A C G T A G T C A G T C A C T G A G T C A C G T A C T G A G T C A C T G C G T A
Reverse Opposite:
A C G T A G T C A C T G A G T C C G T A A C T G A G T C A C T G A C T G C G T A A G T C A C G T A C T G
p-value:1e-5
log p-value:-1.244e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets20.0 +/- 19.1bp
Average Position of motif in Background51.3 +/- 13.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP/MA0131.2/Jaspar

Match Rank:1
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAGTCCGCTGCGA
CAACGTCCGCGG---
 A C G T A C G T A G T C C G T A A C T G A C G T A G T C A G T C A C T G A G T C A C G T A C T G A G T C A C T G C G T A
A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G A C G T A C G T A C G T

Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer

Match Rank:2
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------CAGTCCGCTGCGA--
ANTTMRCASBNNNGTGYKAAN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C G T A G T C A G T C A C T G A G T C A C G T A C T G A G T C A C T G C G T A A C G T A C G T
C G T A C G A T G A C T G A C T T G A C C T G A A T G C C T G A T A G C A G T C A C G T T C G A C A T G T A C G G A C T A T C G G A C T A C G T C T G A T C G A C G T A

NHLH1/MA0048.2/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CAGTCCGCTGCGA
--CGCAGCTGCG-
 A G T C C G T A A C T G A C G T A G T C A G T C A C T G A G T C A C G T A C T G A G T C A C T G C G T A
A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T

EBF1/MA0154.3/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CAGTCCGCTGCGA--
-ATTCCCAAGGGAAT
 A G T C C G T A A C T G A C G T A G T C A G T C A C T G A G T C A C G T A C T G A G T C A C T G C G T A A C G T A C G T
A C G T C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T

ZIC3/MA0697.1/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CAGTCCGCTGCGA
GACCCCCCGCTGCGC
 A C G T A C G T A G T C C G T A A C T G A C G T A G T C A G T C A C T G A G T C A C G T A C T G A G T C A C T G C G T A
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CAGTCCGCTGCGA
-NGTCCCNNGGGA
 A G T C C G T A A C T G A C G T A G T C A G T C A C T G A G T C A C G T A C T G A G T C A C T G C G T A
A C G T C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A

Zfx/MA0146.2/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CAGTCCGCTGCGA-
CAGGCCNNGGCCNN
 A G T C C G T A A C T G A C G T A G T C A G T C A C T G A G T C A C G T A C T G A G T C A C T G C G T A A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZIC1/MA0696.1/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CAGTCCGCTGCGA
GACCCCCCGCTGTG-
 A C G T A C G T A G T C C G T A A C T G A C G T A G T C A G T C A C T G A G T C A C G T A C T G A G T C A C T G C G T A
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CAGTCCGCTGCGA-----
-AGGACGCTGTAAAGGGA
 A G T C C G T A A C T G A C G T A G T C A G T C A C T G A G T C A C G T A C T G A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

Rhox11/MA0629.1/Jaspar

Match Rank:10
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CAGTCCGCTGCGA-----
-AAGACGCTGTAAAGCGA
 A G T C C G T A A C T G A C G T A G T C A G T C A C T G A G T C A C G T A C T G A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A