Information for 19-GCGTGCGGGKAAG (Motif 32)

C T A G A T G C A T C G A C G T A T C G A T G C C T A G T A C G T C A G A C T G T C G A C G T A A C T G
Reverse Opposite:
A G T C G C A T A G C T T G A C A G T C A G T C A G T C T A C G T A G C T G C A A T G C A T C G A G T C
p-value:1e-7
log p-value:-1.740e+01
Information Content per bp:1.690
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.81%
Number of Background Sequences with motif268.3
Percentage of Background Sequences with motif0.57%
Average Position of motif in Targets52.4 +/- 23.7bp
Average Position of motif in Background49.5 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EGR4/MA0733.1/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----GCGTGCGGGKAAG
AANTGCGTGGGCGTNN-
 A C G T A C G T A C G T A C G T C T A G A T G C A T C G A C G T A T C G A T G C C T A G T A C G T C A G A C T G T C G A C G T A A C T G
C G T A C G T A C G T A A C G T T C A G T A G C T C A G C A G T T C A G A C T G T C A G G T A C T C A G C A G T C T G A C T G A A C G T

EGR2/MA0472.2/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCGTGCGGGKAAG
TGCGTGGGCGT---
 A C G T C T A G A T G C A T C G A C G T A T C G A T G C C T A G T A C G T C A G A C T G T C G A C G T A A C T G
G A C T T C A G G T A C T C A G A C G T T C A G A C T G T C A G G A T C T C A G C A G T A C G T A C G T A C G T

EGR3/MA0732.1/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GCGTGCGGGKAAG
ANTGCGTGGGCGTNN-
 A C G T A C G T A C G T C T A G A T G C A T C G A C G T A T C G A T G C C T A G T A C G T C A G A C T G T C G A C G T A A C T G
C G T A C T A G G A C T C T A G A G T C T A C G A C G T T C A G C T A G A T C G G A T C C T A G C A G T C T G A C T A G A C G T

GCM2/MA0767.1/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GCGTGCGGGKAAG
-TATGCGGGTA--
 C T A G A T G C A T C G A C G T A T C G A T G C C T A G T A C G T C A G A C T G T C G A C G T A A C T G
A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCGTGCGGGKAAG
TGCCCNGGGGCA--
 A C G T C T A G A T G C A T C G A C G T A T C G A T G C C T A G T A C G T C A G A C T G T C G A C G T A A C T G
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCGTGCGGGKAAG
NGCGTGGGCGGR--
 A C G T C T A G A T G C A T C G A C G T A T C G A T G C C T A G T A C G T C A G A C T G T C G A C G T A A C T G
A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCGTGCGGGKAAG
TGCGTG--------
 A C G T C T A G A T G C A T C G A C G T A T C G A T G C C T A G T A C G T C A G A C T G T C G A C G T A A C T G
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GCM1/MA0646.1/Jaspar

Match Rank:8
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GCGTGCGGGKAAG
-CATGCGGGTAC-
 C T A G A T G C A T C G A C G T A T C G A T G C C T A G T A C G T C A G A C T G T C G A C G T A A C T G
A C G T A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCGTGCGGGKAAG
TGCGTGGGYG----
 A C G T C T A G A T G C A T C G A C G T A T C G A T G C C T A G T A C G T C A G A C T G T C G A C G T A A C T G
C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GCGTGCGGGKAAG
TTGCGTGCVA-----
 A C G T A C G T C T A G A T G C A T C G A C G T A T C G A T G C C T A G T A C G T C A G A C T G T C G A C G T A A C T G
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T A C G T A C G T A C G T A C G T