Information for 6-TCTGCCAAAC (Motif 13)

C G A T G A T C A C G T A C T G A T G C A G T C G T C A C T G A T C G A G A T C
Reverse Opposite:
C T A G A G C T A G C T A C G T A C T G A T C G A G T C C G T A C T A G G C T A
p-value:1e-11
log p-value:-2.652e+01
Information Content per bp:1.750
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif5.02%
Number of Background Sequences with motif544.7
Percentage of Background Sequences with motif1.17%
Average Position of motif in Targets52.1 +/- 27.1bp
Average Position of motif in Background49.2 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.87
Offset:0
Orientation:forward strand
Alignment:TCTGCCAAAC
GGTGCCAAGT
 C G A T G A T C A C G T A C T G A T G C A G T C G T C A C T G A T C G A G A T C
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.87
Offset:1
Orientation:forward strand
Alignment:TCTGCCAAAC
-TTGCCAAG-
 C G A T G A T C A C G T A C T G A T G C A G T C G T C A C T G A T C G A G A T C
A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.84
Offset:0
Orientation:forward strand
Alignment:TCTGCCAAAC
CGTGCCAAG-
 C G A T G A T C A C G T A C T G A T G C A G T C G T C A C T G A T C G A G A T C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.83
Offset:2
Orientation:reverse strand
Alignment:TCTGCCAAAC
--TGCCAA--
 C G A T G A T C A C G T A C T G A T G C A G T C G T C A C T G A T C G A G A T C
A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.77
Offset:1
Orientation:forward strand
Alignment:TCTGCCAAAC
-ATGCCAACC
 C G A T G A T C A C G T A C T G A T G C A G T C G T C A C T G A T C G A G A T C
A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

PB0029.1_Hic1_1/Jaspar

Match Rank:6
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--TCTGCCAAAC----
ACTATGCCAACCTACC
 A C G T A C G T C G A T G A T C A C G T A C T G A T G C A G T C G T C A C T G A T C G A G A T C A C G T A C G T A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

HIC2/MA0738.1/Jaspar

Match Rank:7
Score:0.73
Offset:1
Orientation:forward strand
Alignment:TCTGCCAAAC
-ATGCCCACC
 C G A T G A T C A C G T A C T G A T G C A G T C G T C A C T G A T C G A G A T C
A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

MEIS2/MA0774.1/Jaspar

Match Rank:8
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TCTGCCAAAC
GCTGTCAA--
 C G A T G A T C A C G T A C T G A T G C A G T C G T C A C T G A T C G A G A T C
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TCTGCCAAAC
RHTGWCAR--
 C G A T G A T C A C G T A C T G A T G C A G T C G T C A C T G A T C G A G A T C
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:10
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TCTGCCAAAC
CCTGTCAA--
 C G A T G A T C A C G T A C T G A T G C A G T C G T C A C T G A T C G A G A T C
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T