Information for 11-TGAGYATTTTGGC (Motif 14)

A C G T A T C G C G T A A C T G A G C T G T C A A G C T A C G T A C G T A C G T A T C G A C T G A G T C
Reverse Opposite:
A C T G A G T C A T G C C G T A C G T A T C G A C T G A A C G T T C G A G T A C C G A T A T G C C G T A
p-value:1e-11
log p-value:-2.743e+01
Information Content per bp:1.803
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.2 +/- 18.3bp
Average Position of motif in Background50.1 +/- 19.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--TGAGYATTTTGGC-
NNTGTTTATTTTGGCA
 A C G T A C G T A C G T A T C G C G T A A C T G A G C T G T C A A G C T A C G T A C G T A C G T A T C G A C T G A G T C A C G T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.68
Offset:8
Orientation:forward strand
Alignment:TGAGYATTTTGGC-
--------TTGGCA
 A C G T A T C G C G T A A C T G A G C T G T C A A G C T A C G T A C G T A C G T A T C G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.68
Offset:7
Orientation:reverse strand
Alignment:TGAGYATTTTGGC---
-------NTTGGCANN
 A C G T A T C G C G T A A C T G A G C T G T C A A G C T A C G T A C G T A C G T A T C G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.66
Offset:6
Orientation:reverse strand
Alignment:TGAGYATTTTGGC---
------NNTTGGCANN
 A C G T A T C G C G T A A C T G A G C T G T C A A G C T A C G T A C G T A C G T A T C G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:TGAGYATTTTGGC--
-------CTTGGCAA
 A C G T A T C G C G T A A C T G A G C T G T C A A G C T A C G T A C G T A C G T A T C G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

E2F7/MA0758.1/Jaspar

Match Rank:6
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:TGAGYATTTTGGC-------
------TTTTGGCGGGAAAA
 A C G T A T C G C G T A A C T G A G C T G T C A A G C T A C G T A C G T A C G T A T C G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G A T G C A T C G A T T A C G A C T G A G T C A C T G A T C G A T C G C T G A C T G A G C T A G C T A

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TGAGYATTTTGGC-----
---WCATTTTGKCCTCYT
 A C G T A T C G C G T A A C T G A G C T G T C A A G C T A C G T A C G T A C G T A T C G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:8
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TGAGYATTTTGGC--------
----NNNNTTGGCGCCGANNN
 A C G T A T C G C G T A A C T G A G C T G T C A A G C T A C G T A C G T A C G T A T C G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:9
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:TGAGYATTTTGGC-----
------TTTTCGCGCGAA
 A C G T A T C G C G T A A C T G A G C T G T C A A G C T A C G T A C G T A C G T A T C G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A G C T A G C T A G C T A T G C A T C G A G T C A C T G A T G C A T C G T C G A T C G A

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:TGAGYATTTTGGC--
------GGTTGGCAT
 A C G T A T C G C G T A A C T G A G C T G T C A A G C T A C G T A C G T A C G T A T C G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T