Information for 6-CATAAARTTTTATTGC (Motif 8)

G T A C C G T A A G C T G C T A C G T A C T G A C T A G A C G T A C G T A C G T C G A T C G T A G A C T C G A T A C T G G A T C
Reverse Opposite:
C T A G A G T C C G T A C T G A A C G T C G T A C G T A C G T A G T C A G A T C A G C T C G A T C G A T C T G A A C G T A C T G
p-value:1e-14
log p-value:-3.328e+01
Information Content per bp:1.755
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.4 +/- 22.1bp
Average Position of motif in Background44.2 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0075.1_Hoxd10/Jaspar

Match Rank:1
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:CATAAARTTTTATTGC---
--NTNAATTTTATTGNATT
 G T A C C G T A A G C T G C T A C G T A C T G A C T A G A C G T A C G T A C G T C G A T C G T A G A C T C G A T A C T G G A T C A C G T A C G T A C G T
A C G T A C G T C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:2
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:CATAAARTTTTATTGC---
---NNANTTTTATTGGNNN
 G T A C C G T A A G C T G C T A C G T A C T G A C T A G A C G T A C G T A C G T C G A T C G T A G A C T C G A T A C T G G A T C A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

Hoxd9/MA0913.1/Jaspar

Match Rank:3
Score:0.70
Offset:6
Orientation:reverse strand
Alignment:CATAAARTTTTATTGC
------TTTTTATTGC
 G T A C C G T A A G C T G C T A C G T A C T G A C T A G A C G T A C G T A C G T C G A T C G T A G A C T C G A T A C T G G A T C
A C G T A C G T A C G T A C G T A C G T A C G T C G A T G C A T C A G T C G A T C G A T C G T A G A C T A C G T C T A G A G T C

HOXB13/MA0901.1/Jaspar

Match Rank:4
Score:0.70
Offset:6
Orientation:reverse strand
Alignment:CATAAARTTTTATTGC
------NTTTTATTGG
 G T A C C G T A A G C T G C T A C G T A C T G A C T A G A C G T A C G T A C G T C G A T C G T A G A C T C G A T A C T G G A T C
A C G T A C G T A C G T A C G T A C G T A C G T C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G

CDX1/MA0878.1/Jaspar

Match Rank:5
Score:0.70
Offset:7
Orientation:reverse strand
Alignment:CATAAARTTTTATTGC
-------TTTTATTGC
 G T A C C G T A A G C T G C T A C G T A C T G A C T A G A C G T A C G T A C G T C G A T C G T A G A C T C G A T A C T G G A T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:6
Score:0.70
Offset:7
Orientation:reverse strand
Alignment:CATAAARTTTTATTGC-
-------TTTAATTGCN
 G T A C C G T A A G C T G C T A C G T A C T G A C T A G A C G T A C G T A C G T C G A T C G T A G A C T C G A T A C T G G A T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C

HOXA10/MA0899.1/Jaspar

Match Rank:7
Score:0.70
Offset:6
Orientation:reverse strand
Alignment:CATAAARTTTTATTGC-
------NTTTTATTACN
 G T A C C G T A A G C T G C T A C G T A C T G A C T A G A C G T A C G T A C G T C G A T C G T A G A C T C G A T A C T G G A T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C

HOXA13/MA0650.1/Jaspar

Match Rank:8
Score:0.70
Offset:6
Orientation:reverse strand
Alignment:CATAAARTTTTATTGC
------TTTTTATTGG
 G T A C C G T A A G C T G C T A C G T A C T G A C T A G A C G T A C G T A C G T C G A T C G T A G A C T C G A T A C T G G A T C
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G

HOXD13/MA0909.1/Jaspar

Match Rank:9
Score:0.69
Offset:6
Orientation:reverse strand
Alignment:CATAAARTTTTATTGC
------NTTTTATTGG
 G T A C C G T A A G C T G C T A C G T A C T G A C T A G A C G T A C G T A C G T C G A T C G T A G A C T C G A T A C T G G A T C
A C G T A C G T A C G T A C G T A C G T A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G

PH0013.1_Cdx2/Jaspar

Match Rank:10
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:CATAAARTTTTATTGC----
----NAATTTTATTACCNNN
 G T A C C G T A A G C T G C T A C G T A C T G A C T A G A C G T A C G T A C G T C G A T C G T A G A C T C G A T A C T G G A T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T