Information for 2-ASTTTTATKAGSH (Motif 2)

C G T A A T C G G A C T A C G T A C G T G C A T T C G A G C A T A C T G C G T A A T C G A T G C G A T C
Reverse Opposite:
C T A G A T C G T A G C G C A T G T A C C G T A A G C T C G T A C G T A C G T A C T G A T A G C G A C T
p-value:1e-38
log p-value:-8.772e+01
Information Content per bp:1.596
Number of Target Sequences with motif115.0
Percentage of Target Sequences with motif14.18%
Number of Background Sequences with motif1536.9
Percentage of Background Sequences with motif3.30%
Average Position of motif in Targets52.1 +/- 23.4bp
Average Position of motif in Background51.2 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:1
Score:0.90
Offset:2
Orientation:reverse strand
Alignment:ASTTTTATKAGSH
--TTTTATTRGN-
 C G T A A T C G G A C T A C G T A C G T G C A T T C G A G C A T A C T G C G T A A T C G A T G C G A T C
A C G T A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:2
Score:0.89
Offset:2
Orientation:forward strand
Alignment:ASTTTTATKAGSH
--TTTTATKRGG-
 C G T A A T C G G A C T A C G T A C G T G C A T T C G A G C A T A C T G C G T A A T C G A T G C G A T C
A C G T A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:3
Score:0.88
Offset:1
Orientation:reverse strand
Alignment:ASTTTTATKAGSH
-NTTTTATTGG--
 C G T A A T C G G A C T A C G T A C G T G C A T T C G A G C A T A C T G C G T A A T C G A T G C G A T C
A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T A C G T

PH0068.1_Hoxc13/Jaspar

Match Rank:4
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-ASTTTTATKAGSH--
NAATTTTACGAGNTNN
 A C G T C G T A A T C G G A C T A C G T A C G T G C A T T C G A G C A T A C T G C G T A A T C G A T G C G A T C A C G T A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

HOXA13/MA0650.1/Jaspar

Match Rank:5
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:ASTTTTATKAGSH
-TTTTTATTGG--
 C G T A A T C G G A C T A C G T A C G T G C A T T C G A G C A T A C T G C G T A A T C G A T G C G A T C
A C G T C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:6
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--ASTTTTATKAGSH-
NNAATTTTATTGGNTN
 A C G T A C G T C G T A A T C G G A C T A C G T A C G T G C A T T C G A G C A T A C T G C G T A A T C G A T G C G A T C A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:7
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:ASTTTTATKAGSH
-NTTTTATTGG--
 C G T A A T C G G A C T A C G T A C G T G C A T T C G A G C A T A C T G C G T A A T C G A T G C G A T C
A C G T C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:8
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:ASTTTTATKAGSH
DGWTTTATGRCN-
 C G T A A T C G G A C T A C G T A C G T G C A T T C G A G C A T A C T G C G T A A T C G A T G C G A T C
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:9
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--ASTTTTATKAGSH-
NNANTTTTATTGGNNN
 A C G T A C G T C G T A A T C G G A C T A C G T A C G T G C A T T C G A G C A T A C T G C G T A A T C G A T G C G A T C A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

HOXA10/MA0899.1/Jaspar

Match Rank:10
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:ASTTTTATKAGSH
-NTTTTATTACN-
 C G T A A T C G G A C T A C G T A C G T G C A T T C G A G C A T A C T G C G T A A T C G A T G C G A T C
A C G T C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C A C G T