Information for 5-WAGATCAAGGACACAG (Motif 7)

G C T A C G T A A T C G G C T A A C G T T G A C T C G A C G T A A C T G A C T G C G T A A G T C C G T A A T G C C G T A A C T G
Reverse Opposite:
A G T C G A C T A T C G A C G T A C T G C G A T T G A C A G T C C G A T A G C T A C T G G T C A C G A T A T G C C G A T C G A T
p-value:1e-13
log p-value:-2.998e+01
Information Content per bp:1.738
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif6.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.8 +/- 28.8bp
Average Position of motif in Background36.3 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2/MA0505.1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:WAGATCAAGGACACAG
AAGTTCAAGGTCAGC-
 G C T A C G T A A T C G G C T A A C G T T G A C T C G A C G T A A C T G A C T G C G T A A G T C C G T A A T G C C G T A A C T G
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:WAGATCAAGGACACAG
-AGGTCAAGGTCA---
 G C T A C G T A A T C G G C T A A C G T T G A C T C G A C G T A A C T G A C T G C G T A A G T C C G T A A T G C C G T A A C T G
A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A A C G T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:3
Score:0.68
Offset:1
Orientation:forward strand
Alignment:WAGATCAAGGACACAG
-AGGTCAAGGTCA---
 G C T A C G T A A T C G G C T A A C G T T G A C T C G A C G T A A C T G A C T G C G T A A G T C C G T A A T G C C G T A A C T G
A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:4
Score:0.67
Offset:6
Orientation:forward strand
Alignment:WAGATCAAGGACACAG
------AAGGTCAC--
 G C T A C G T A A T C G G C T A A C G T T G A C T C G A C G T A A C T G A C T G C G T A A G T C C G T A A T G C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:WAGATCAAGGACACAG
----TCAAGGTCAN--
 G C T A C G T A A T C G G C T A A C G T T G A C T C G A C G T A A C T G A C T G C G T A A G T C C G T A A T G C C G T A A C T G
A C G T A C G T A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:6
Score:0.66
Offset:5
Orientation:forward strand
Alignment:WAGATCAAGGACACAG
-----CAAGGHCANV-
 G C T A C G T A A T C G G C T A A C G T T G A C T C G A C G T A A C T G A C T G C G T A A G T C C G T A A T G C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T

RORA/MA0071.1/Jaspar

Match Rank:7
Score:0.65
Offset:3
Orientation:forward strand
Alignment:WAGATCAAGGACACAG
---ATCAAGGTCA---
 G C T A C G T A A T C G G C T A A C G T T G A C T C G A C G T A A C T G A C T G C G T A A G T C C G T A A T G C C G T A A C T G
A C G T A C G T A C G T C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.65
Offset:3
Orientation:forward strand
Alignment:WAGATCAAGGACACAG
---BTCAAGGTCA---
 G C T A C G T A A T C G G C T A A C G T T G A C T C G A C G T A A C T G A C T G C G T A A G T C C G T A A T G C C G T A A C T G
A C G T A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.64
Offset:3
Orientation:forward strand
Alignment:WAGATCAAGGACACAG
---NTCAAGGTCA---
 G C T A C G T A A T C G G C T A A C G T T G A C T C G A C G T A A C T G A C T G C G T A A G T C C G T A A T G C C G T A A C T G
A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:10
Score:0.63
Offset:4
Orientation:forward strand
Alignment:WAGATCAAGGACACAG
----TCAAGGTCATA-
 G C T A C G T A A T C G G C T A A C G T T G A C T C G A C G T A A C T G A C T G C G T A A G T C C G T A A T G C C G T A A C T G
A C G T A C G T A C G T A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A A C G T