Information for 3-CAGGCACATT (Motif 10)

G A T C G C T A C A T G T A C G T A G C T G C A G A T C G C T A A C G T C A G T
Reverse Opposite:
G T C A T G C A C G A T C T A G A C G T A T C G A T G C G T A C C G A T C T A G
p-value:1e-11
log p-value:-2.761e+01
Information Content per bp:1.654
Number of Target Sequences with motif63.0
Percentage of Target Sequences with motif8.74%
Number of Background Sequences with motif1517.2
Percentage of Background Sequences with motif3.16%
Average Position of motif in Targets46.3 +/- 25.1bp
Average Position of motif in Background50.0 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-CAGGCACATT
CCAGGAACAG-
 A C G T G A T C G C T A C A T G T A C G T A G C T G C A G A T C G C T A A C G T C A G T
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CAGGCACATT-----
CGAAGCACACAAAATA
 A C G T G A T C G C T A C A T G T A C G T A G C T G C A G A T C G C T A A C G T C A G T A C G T A C G T A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

POU2F2/MA0507.1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCACATT--
ATATGCAAATNNN
 A C G T G A T C G C T A C A T G T A C G T A G C T G C A G A T C G C T A A C G T C A G T A C G T A C G T
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CAGGCACATT-
AAGGCAAGTGT
 G A T C G C T A C A T G T A C G T A G C T G C A G A T C G C T A A C G T C A G T A C G T
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCACATT---------
YCAGGCWCAGTACCAGGCTC
 A C G T G A T C G C T A C A T G T A C G T A G C T G C A G A T C G C T A A C G T C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

Myc/MA0147.2/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CAGGCACATT-
-AAGCACATGG
 G A T C G C T A C A T G T A C G T A G C T G C A G A T C G C T A A C G T C A G T A C G T
A C G T T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G

HIC2/MA0738.1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CAGGCACATT
NGTGGGCAT---
 A C G T A C G T G A T C G C T A C A T G T A C G T A G C T G C A G A T C G C T A A C G T C A G T
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CAGGCACATT
TBGCACGCAA---
 A C G T A C G T A C G T G A T C G C T A C A T G T A C G T A G C T G C A G A T C G C T A A C G T C A G T
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CAGGCACATT
ATATGCAAAT-
 A C G T G A T C G C T A C A T G T A C G T A G C T G C A G A T C G C T A A C G T C A G T
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CAGGCACATT---
TTGTATGCAAATTAGA
 A C G T A C G T A C G T G A T C G C T A C A T G T A C G T A G C T G C A G A T C G C T A A C G T C A G T A C G T A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A