Information for 6-TGCCAGCCGATTC (Motif 11)

A C G T A C T G A G T C G T A C C G T A A C T G A G T C A G T C C A T G T C G A A C G T A G C T T A G C
Reverse Opposite:
A T C G C T G A G T C A A C G T G T A C A C T G A C T G A G T C A C G T A C T G A C T G G T A C C G T A
p-value:1e-11
log p-value:-2.569e+01
Information Content per bp:1.823
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif8.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets57.6 +/- 22.0bp
Average Position of motif in Background55.3 +/- 21.8bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0029.1_Hic1_1/Jaspar

Match Rank:1
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----TGCCAGCCGATTC
ACTATGCCAACCTACC-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C G T A C C G T A A C T G A G T C A G T C C A T G T C G A A C G T A G C T T A G C
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C A C G T

Hic1/MA0739.1/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TGCCAGCCGATTC
ATGCCAACC-----
 A C G T A C G T A C T G A G T C G T A C C G T A A C T G A G T C A G T C C A T G T C G A A C G T A G C T T A G C
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGCCAGCCGATTC
ATGCCAGACN----
 A C G T A C G T A C T G A G T C G T A C C G T A A C T G A G T C A G T C C A T G T C G A A C G T A G C T T A G C
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TGCCAGCCGATTC
---CAGCC-----
 A C G T A C T G A G T C G T A C C G T A A C T G A G T C A G T C C A T G T C G A A C G T A G C T T A G C
A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGCCAGCCGATTC
TTGCCAAG------
 A C G T A C G T A C T G A G T C G T A C C G T A A C T G A G T C A G T C C A T G T C G A A C G T A G C T T A G C
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TGCCAGCCGATTC
NNATTGACAGGTGCTT-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C G T A C C G T A A C T G A G T C A G T C C A T G T C G A A C G T A G C T T A G C
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TGCCAGCCGATTC
CGTGCCAAG------
 A C G T A C G T A C G T A C T G A G T C G T A C C G T A A C T G A G T C A G T C C A T G T C G A A C G T A G C T T A G C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TGCCAGCCGATTC
VBTGWCAGCB-----
 A C G T A C G T A C G T A C T G A G T C G T A C C G T A A C T G A G T C A G T C C A T G T C G A A C G T A G C T T A G C
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TGCCAGCCGATTC
AGGTGHCAGACA----
 A C G T A C G T A C G T A C G T A C T G A G T C G T A C C G T A A C T G A G T C A G T C C A T G T C G A A C G T A G C T T A G C
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGCCAGCCGATTC
TTCCCGCCWG---
 A C G T A C T G A G T C G T A C C G T A A C T G A G T C A G T C C A T G T C G A A C G T A G C T T A G C
A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G A C G T A C G T A C G T