Information for 3-GAACGTSCCTGCCAGG (Motif 9)

A T C G G T C A T G C A T A G C A C T G A C G T A T C G G T A C A G T C A G C T A T C G G T A C T G A C T G C A C T A G C T A G
Reverse Opposite:
A G T C A G T C A C G T A C T G C A T G A T G C C T G A A C T G A C T G T A G C T G C A T G A C A C T G A C G T C A G T T A G C
p-value:1e-11
log p-value:-2.534e+01
Information Content per bp:1.663
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif3.43%
Number of Background Sequences with motif377.4
Percentage of Background Sequences with motif0.78%
Average Position of motif in Targets54.2 +/- 23.8bp
Average Position of motif in Background51.1 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:1
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GAACGTSCCTGCCAGG----
-----TCCCAGMCRAGCCCC
 A T C G G T C A T G C A T A G C A C T G A C G T A T C G G T A C A G T C A G C T A T C G G T A C T G A C T G C A C T A G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.56
Offset:8
Orientation:forward strand
Alignment:GAACGTSCCTGCCAGG
--------TTGCCAAG
 A T C G G T C A T G C A T A G C A C T G A C G T A T C G G T A C A G T C A G C T A T C G G T A C T G A C T G C A C T A G C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GAACGTSCCTGCCAGG
NNACTTGCCTT-----
 A T C G G T C A T G C A T A G C A C T G A C G T A T C G G T A C A G T C A G C T A T C G G T A C T G A C T G C A C T A G C T A G
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:4
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GAACGTSCCTGCCAGG--
-----TGCCCTNAGGGCA
 A T C G G T C A T G C A T A G C A C T G A C G T A T C G G T A C A G T C A G C T A T C G G T A C T G A C T G C A C T A G C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:5
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GAACGTSCCTGCCAGG
-----TTCCCGCCWG-
 A T C G G T C A T G C A T A G C A C T G A C G T A T C G G T A C A G T C A G C T A T C G G T A C T G A C T G C A C T A G C T A G
A C G T A C G T A C G T A C G T A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G A C G T

HES7/MA0822.1/Jaspar

Match Rank:6
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GAACGTSCCTGCCAGG
TGGCACGTGCCA------
 A C G T A C G T A T C G G T C A T G C A T A G C A C T G A C G T A T C G G T A C A G T C A G C T A T C G G T A C T G A C T G C A C T A G C T A G
G A C T T C A G T C A G G A T C T C G A A G T C C T A G G A C T T C A G G A T C A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:7
Score:0.52
Offset:6
Orientation:forward strand
Alignment:GAACGTSCCTGCCAGG
------VGCTGWCAVB
 A T C G G T C A T G C A T A G C A C T G A C G T A T C G G T A C A G T C A G C T A T C G G T A C T G A C T G C A C T A G C T A G
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:8
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:GAACGTSCCTGCCAGG--
-----TGCCCTNAGGGCA
 A T C G G T C A T G C A T A G C A C T G A C G T A T C G G T A C A G T C A G C T A T C G G T A C T G A C T G C A C T A G C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:9
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:GAACGTSCCTGCCAGG--
-----TGCCCNNAGGGCA
 A T C G G T C A T G C A T A G C A C T G A C G T A T C G G T A C A G T C A G C T A T C G G T A C T G A C T G C A C T A G C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

HES5/MA0821.1/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GAACGTSCCTGCCAGG
CGGCACGTGCCA------
 A C G T A C G T A T C G G T C A T G C A T A G C A C T G A C G T A T C G G T A C A G T C A G C T A T C G G T A C T G A C T G C A C T A G C T A G
G A T C T C A G T C A G A G T C C T G A G A T C C T A G A G C T A C T G A G T C A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T