Information for 3-CATATTTGCT (Motif 5)

G T A C C G T A A C G T T C G A A C G T A C G T A G C T A T C G A G T C C G A T
Reverse Opposite:
C G T A A C T G A T G C C T G A C G T A C G T A A G C T G T C A A C G T A C T G
p-value:1e-12
log p-value:-2.853e+01
Information Content per bp:1.859
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.72%
Number of Background Sequences with motif65.0
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets44.7 +/- 20.2bp
Average Position of motif in Background50.5 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:1
Score:0.72
Offset:2
Orientation:forward strand
Alignment:CATATTTGCT--
--TRTTTACTTW
 G T A C C G T A A C G T T C G A A C G T A C G T A G C T A T C G A G T C C G A T A C G T A C G T
A C G T A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A

FOXA1/MA0148.3/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CATATTTGCT---
TCCATGTTTACTTTG
 A C G T A C G T G T A C C G T A A C G T T C G A A C G T A C G T A G C T A T C G A G T C C G A T A C G T A C G T A C G T
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G

FOXC1/MA0032.2/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CATATTTGCT--
-ATATTTACATA
 G T A C C G T A A C G T T C G A A C G T A C G T A G C T A T C G A G T C C G A T A C G T A C G T
A C G T C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A

FOXB1/MA0845.1/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CATATTTGCT--
-ATATTTACATA
 G T A C C G T A A C G T T C G A A C G T A C G T A G C T A T C G A G T C C G A T A C G T A C G T
A C G T C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:5
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CATATTTGCT--
--TGTTTACTTT
 G T A C C G T A A C G T T C G A A C G T A C G T A G C T A T C G A G T C C G A T A C G T A C G T
A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CATATTTGCT---
---ATTTCCTGTN
 G T A C C G T A A C G T T C G A A C G T A C G T A G C T A T C G A G T C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CATATTTGCT--
--TGTTTACTTT
 G T A C C G T A A C G T T C G A A C G T A C G T A G C T A T C G A G T C C G A T A C G T A C G T
A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CATATTTGCT---
---ATTTGCATAT
 G T A C C G T A A C G T T C G A A C G T A C G T A G C T A T C G A G T C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CATATTTGCT----
BSNTGTTTACWYWGN
 A C G T G T A C C G T A A C G T T C G A A C G T A C G T A G C T A T C G A G T C C G A T A C G T A C G T A C G T A C G T
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CATATTTGCT---
---ATTTGCATAA
 G T A C C G T A A C G T T C G A A C G T A C G T A G C T A T C G A G T C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A