Information for 1-TGTGTAAATA (Motif 1)

C A G T C A T G C G A T C A T G A C G T G C T A G C T A G T C A A G C T C G T A
Reverse Opposite:
G C A T T C G A C A G T C G A T C G A T T G C A G T A C G C T A G T A C G T C A
p-value:1e-15
log p-value:-3.469e+01
Information Content per bp:1.659
Number of Target Sequences with motif53.0
Percentage of Target Sequences with motif5.69%
Number of Background Sequences with motif729.6
Percentage of Background Sequences with motif1.51%
Average Position of motif in Targets48.4 +/- 29.8bp
Average Position of motif in Background48.9 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXB1/MA0845.1/Jaspar

Match Rank:1
Score:0.85
Offset:0
Orientation:forward strand
Alignment:TGTGTAAATA-
TATGTAAATAT
 C A G T C A T G C G A T C A T G A C G T G C T A G C T A G T C A A G C T C G T A A C G T
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T

FOXC1/MA0032.2/Jaspar

Match Rank:2
Score:0.80
Offset:0
Orientation:forward strand
Alignment:TGTGTAAATA-
TATGTAAATAT
 C A G T C A T G C G A T C A T G A C G T G C T A G C T A G T C A A G C T C G T A A C G T
G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:3
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--TGTGTAAATA---
NCWRWGTAAACANSV
 A C G T A C G T C A G T C A T G C G A T C A T G A C G T G C T A G C T A G T C A A G C T C G T A A C G T A C G T A C G T
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:4
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:TGTGTAAATA--
TATGTAAACANG
 C A G T C A T G C G A T C A T G A C G T G C T A G C T A G T C A A G C T C G T A A C G T A C G T
G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

Foxa2/MA0047.2/Jaspar

Match Rank:5
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--TGTGTAAATA
NCTAAGTAAACA
 A C G T A C G T C A G T C A T G C G A T C A T G A C G T G C T A G C T A G T C A A G C T C G T A
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A

FOXA1/MA0148.3/Jaspar

Match Rank:6
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-TGTGTAAATA----
CAAAGTAAACANNNN
 A C G T C A G T C A T G C G A T C A T G A C G T G C T A G C T A G T C A A G C T C G T A A C G T A C G T A C G T A C G T
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.77
Offset:-5
Orientation:forward strand
Alignment:-----TGTGTAAATA--
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A C G T A C G T C A G T C A T G C G A T C A T G A C G T G C T A G C T A G T C A A G C T C G T A A C G T A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:8
Score:0.75
Offset:0
Orientation:forward strand
Alignment:TGTGTAAATA
AAAGTAAACA
 C A G T C A T G C G A T C A T G A C G T G C T A G C T A G T C A A G C T C G T A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:9
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TGTGTAAATA
WAAGTAAAYA
 C A G T C A T G C G A T C A T G A C G T G C T A G C T A G T C A A G C T C G T A
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.74
Offset:0
Orientation:forward strand
Alignment:TGTGTAAATA
AAAGTAAACA
 C A G T C A T G C G A T C A T G A C G T G C T A G C T A G T C A A G C T C G T A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A