Information for 1-GAGGTGTTTTGCT (Motif 3)

A C T G C G T A A C T G T A C G A C G T A C T G A C G T A C G T A C G T A C G T T A C G A T G C A C G T
Reverse Opposite:
C G T A A T C G A T G C C G T A G T C A G T C A C G T A G T A C G T C A A G T C A G T C C G A T A G T C
p-value:1e-11
log p-value:-2.667e+01
Information Content per bp:1.807
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif11.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets49.3 +/- 30.4bp
Average Position of motif in Background45.0 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0141.1_Isgf3g_2/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GAGGTGTTTTGCT
NNGTANTGTTTTNC-
 A C G T A C G T A C T G C G T A A C T G T A C G A C G T A C T G A C G T A C G T A C G T A C G T T A C G A T G C A C G T
G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GAGGTGTTTTGCT---
NNCTTTGTTTTGNTNNN
 A C G T A C T G C G T A A C T G T A C G A C G T A C T G A C G T A C G T A C G T A C G T T A C G A T G C A C G T A C G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GAGGTGTTTTGCT--
NNTTTTGTTTTGATNT
 A C G T A C T G C G T A A C T G T A C G A C G T A C T G A C G T A C G T A C G T A C G T T A C G A T G C A C G T A C G T A C G T
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T

PB0120.1_Foxj1_2/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GAGGTGTTTTGCT--
GTNTTGTTGTGANNT
 A C T G C G T A A C T G T A C G A C G T A C T G A C G T A C G T A C G T A C G T T A C G A T G C A C G T A C G T A C G T
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

PB0122.1_Foxk1_2/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GAGGTGTTTTGCT---
-NNNTGTTGTTGTTNG
 A C T G C G T A A C T G T A C G A C G T A C T G A C G T A C G T A C G T A C G T T A C G A T G C A C G T A C G T A C G T A C G T
A C G T C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

TBX5/MA0807.1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GAGGTGTTTTGCT
-AGGTGTGA----
 A C T G C G T A A C T G T A C G A C G T A C T G A C G T A C G T A C G T A C G T T A C G A T G C A C G T
A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T A C G T A C G T A C G T

POL007.1_BREd/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GAGGTGTTTTGCT
---GTTTGTT---
 A C T G C G T A A C T G T A C G A C G T A C T G A C G T A C G T A C G T A C G T T A C G A T G C A C G T
A C G T A C G T A C G T C T A G A C G T C A G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GAGGTGTTTTGCT
-AGGTGTGA----
 A C T G C G T A A C T G T A C G A C G T A C T G A C G T A C G T A C G T A C G T T A C G A T G C A C G T
A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T A C G T A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GAGGTGTTTTGCT
GCGGAGGTGTCGCCTC
 A C G T A C G T A C G T A C T G C G T A A C T G T A C G A C G T A C T G A C G T A C G T A C G T A C G T T A C G A T G C A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GAGGTGTTTTGCT
-AGGTGTCA----
 A C T G C G T A A C T G T A C G A C G T A C T G A C G T A C G T A C G T A C G T T A C G A T G C A C G T
A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T A C G T