Information for 9-TCGGGGCKGAGGA (Motif 20)

A G C T A G T C A C T G A T C G A C T G C T A G A G T C A C T G A C T G C T G A A C T G A C T G G T C A
Reverse Opposite:
A C G T G T A C A G T C A G C T A G T C G T A C A C T G A G T C A G T C A T G C G T A C T A C G C T G A
p-value:1e-8
log p-value:-1.861e+01
Information Content per bp:1.778
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.25%
Number of Background Sequences with motif62.4
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets47.4 +/- 24.9bp
Average Position of motif in Background47.4 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0202.1_Zfp410_2/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TCGGGGCKGAGGA-
NNTNNGGGGCGGNGNGN
 A C G T A C G T A C G T A G C T A G T C A C T G A T C G A C T G C T A G A G T C A C T G A C T G C T G A A C T G A C T G G T C A A C G T
C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TCGGGGCKGAGGA
RGKGGGCGGAGC-
 A G C T A G T C A C T G A T C G A C T G C T A G A G T C A C T G A C T G C T G A A C T G A C T G G T C A
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TCGGGGCKGAGGA
NNTNAGGGGCGGNNNN
 A C G T A C G T A C G T A G C T A G T C A C T G A T C G A C T G C T A G A G T C A C T G A C T G C T G A A C T G A C T G G T C A
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T

SP1/MA0079.3/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TCGGGGCKGAGGA
-GGGGGCGGGGC-
 A G C T A G T C A C T G A T C G A C T G C T A G A G T C A C T G A C T G C T G A A C T G A C T G G T C A
A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TCGGGGCKGAGGA
-GGGGGCGGGGCC
 A G C T A G T C A C T G A T C G A C T G C T A G A G T C A C T G A C T G C T G A A C T G A C T G G T C A
A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

POL003.1_GC-box/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TCGGGGCKGAGGA-
AGGGGGCGGGGCTG
 A G C T A G T C A C T G A T C G A C T G C T A G A G T C A C T G A C T G C T G A A C T G A C T G G T C A A C G T
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

EGR1/MA0162.2/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TCGGGGCKGAGGA
GGCGGGGGCGGGGG-
 A C G T A C G T A G C T A G T C A C T G A T C G A C T G C T A G A G T C A C T G A C T G C T G A A C T G A C T G G T C A
A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TCGGGGCKGAGGA--
-TGGGGCAAAGGTCA
 A G C T A G T C A C T G A T C G A C T G C T A G A G T C A C T G A C T G C T G A A C T G A C T G G T C A A C G T A C G T
A C G T C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TCGGGGCKGAGGA--
-TAGGGCAAAGGTCA
 A G C T A G T C A C T G A T C G A C T G C T A G A G T C A C T G A C T G C T G A A C T G A C T G G T C A A C G T A C G T
A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

NR2C2/MA0504.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TCGGGGCKGAGGA--
AGGGGTCAGAGGTCA
 A G C T A G T C A C T G A T C G A C T G C T A G A G T C A C T G A C T G C T G A A C T G A C T G G T C A A C G T A C G T
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A