Information for 3-TGGTTAGTGTGCTCTG (Motif 7)

A C G T A C T G A C T G C A G T C G A T C G T A A C T G A G C T A C T G A C G T C T A G A T G C C G A T A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G C G T A A T C G A G T C G T C A A G T C C T G A G T A C A C G T C G T A G T C A A G T C A G T C C G T A
p-value:1e-10
log p-value:-2.502e+01
Information Content per bp:1.910
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.4 +/- 30.0bp
Average Position of motif in Background32.2 +/- 18.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGGTTAGTGTGCTCTG
NNNNTTGTGTGCTTNN
 A C G T A C T G A C T G C A G T C G A T C G T A A C T G A G C T A C T G A C G T C T A G A T G C C G A T A G T C A C G T A C T G
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TGGTTAGTGTGCTCTG
-GGTCANNGTGACCTN
 A C G T A C T G A C T G C A G T C G A T C G T A A C T G A G C T A C T G A C G T C T A G A T G C C G A T A G T C A C G T A C T G
A C G T C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

GLI2/MA0734.1/Jaspar

Match Rank:3
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:TGGTTAGTGTGCTCTG
----CAGTGTGGTCGC
 A C G T A C T G A C T G C A G T C G A T C G T A A C T G A G C T A C T G A C G T C T A G A T G C C G A T A G T C A C G T A C T G
A C G T A C G T A C G T A C G T G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C

PB0099.1_Zfp691_1/Jaspar

Match Rank:4
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TGGTTAGTGTGCTCTG----
---NNNNTGAGCACTGTNNG
 A C G T A C T G A C T G C A G T C G A T C G T A A C T G A G C T A C T G A C G T C T A G A T G C C G A T A G T C A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:TGGTTAGTGTGCTCTG
-RGTTAGTGCCCY---
 A C G T A C T G A C T G C A G T C G A T C G T A A C T G A G C T A C T G A C G T C T A G A T G C C G A T A G T C A C G T A C T G
A C G T C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T A C G T A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-TGGTTAGTGTGCTCTG
CAGGTAAGTAT------
 A C G T A C G T A C T G A C T G C A G T C G A T C G T A A C T G A G C T A C T G A C G T C T A G A T G C C G A T A G T C A C G T A C T G
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:TGGTTAGTGTGCTCTG
----NNHTGTGGTTWN
 A C G T A C T G A C T G C A G T C G A T C G T A A C T G A G C T A C T G A C G T C T A G A T G C C G A T A G T C A C G T A C T G
A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:TGGTTAGTGTGCTCTG
------CTGTGGTTTN
 A C G T A C T G A C T G C A G T C G A T C G T A A C T G A G C T A C T G A C G T C T A G A T G C C G A T A G T C A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

PB0130.1_Gm397_2/Jaspar

Match Rank:9
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:TGGTTAGTGTGCTCTG--
--NNGCGTGTGTGCNGCN
 A C G T A C T G A C T G C A G T C G A T C G T A A C T G A G C T A C T G A C G T C T A G A T G C C G A T A G T C A C G T A C T G A C G T A C G T
A C G T A C G T C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

ESR2/MA0258.2/Jaspar

Match Rank:10
Score:0.48
Offset:0
Orientation:forward strand
Alignment:TGGTTAGTGTGCTCTG
AGGTCACCCTGACCT-
 A C G T A C T G A C T G C A G T C G A T C G T A A C T G A G C T A C T G A C G T C T A G A T G C C G A T A G T C A C G T A C T G
C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T A C G T