Information for 5-GCAAAGAKCKGRR (Motif 5)

A C T G A G T C C G T A C G T A C G T A C T A G C T G A A C T G A G T C A C T G A C T G C T G A C T A G
Reverse Opposite:
A G T C A G C T A G T C G T A C A C T G G T A C A G C T A G T C A C G T A C G T A C G T A C T G A G T C
p-value:1e-12
log p-value:-2.920e+01
Information Content per bp:1.869
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets30.7 +/- 30.1bp
Average Position of motif in Background48.7 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4G/MA0484.1/Jaspar

Match Rank:1
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GCAAAGAKCKGRR
AGAGTCCAAAGTCCA---
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A C T A G C T G A A C T G A G T C A C T G A C T G C T G A C T A G
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCAAAGAKCKGRR
-CAAAGGTCAG--
 A C T G A G T C C G T A C G T A C G T A C T A G C T G A A C T G A G T C A C T G A C T G C T G A C T A G
A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:3
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------GCAAAGAKCKGRR
CANAGNNCAAAGTCCA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A C T A G C T G A A C T G A G T C A C T G A C T G C T G A C T A G
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCAAAGAKCKGRR
AGGAAACAGCTG--
 A C G T A C T G A G T C C G T A C G T A C G T A C T A G C T G A A C T G A G T C A C T G A C T G C T G A C T A G
T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G A C G T A C G T

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GCAAAGAKCKGRR
---AACATCTGGA
 A C T G A G T C C G T A C G T A C G T A C T A G C T G A A C T G A G T C A C T G A C T G C T G A C T A G
A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C G T A T G C A C G T A C T G A C T G T G C A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GCAAAGAKCKGRR
TAGGGCAAAGGTCA---
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A C T A G C T G A A C T G A G T C A C T G A C T G C T G A C T A G
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T A C G T A C G T

SPI1/MA0080.4/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GCAAAGAKCKGRR---
--AAAAAGCGGAAGTA
 A C T G A G T C C G T A C G T A C G T A C T A G C T G A A C T G A G T C A C T G A C T G C T G A C T A G A C G T A C G T A C G T
A C G T A C G T T C G A C T G A C G T A C G T A C G T A T A C G T G A C C T A G A T C G G T C A C G T A A T C G G A C T C G T A

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:8
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GCAAAGAKCKGRR
WAAGTAAAYA------
 A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A C T A G C T G A A C T G A G T C A C T G A C T G C T G A C T A G
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GCAAAGAKCKGRR
GGAACAAAGR------
 A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A C T A G C T G A A C T G A G T C A C T G A C T G C T G A C T A G
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GCAAAGAKCKGRR
TGGGGCAAAGGTCA---
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A C T A G C T G A A C T G A G T C A C T G A C T G C T G A C T A G
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T A C G T