p-value: | 1e-23 |
log p-value: | -5.368e+01 |
Information Content per bp: | 1.701 |
Number of Target Sequences with motif | 25.0 |
Percentage of Target Sequences with motif | 3.05% |
Number of Background Sequences with motif | 72.3 |
Percentage of Background Sequences with motif | 0.15% |
Average Position of motif in Targets | 46.0 +/- 27.0bp |
Average Position of motif in Background | 50.2 +/- 25.9bp |
Strand Bias (log2 ratio + to - strand density) | -0.5 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 1 |
Score: | 0.89 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TGGCARTSWGCCA- CTTGGCANNNTGCCAA |
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Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 2 |
Score: | 0.88 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGGCARTSWGCCA- TGGCAGNCTGCCAG |
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NFIC::TLX1/MA0119.1/Jaspar
Match Rank: | 3 |
Score: | 0.85 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TGGCARTSWGCCA- TGGCACCATGCCAA |
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NFIX/MA0671.1/Jaspar
Match Rank: | 4 |
Score: | 0.63 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | TGGCARTSWGCCA-- ------CGTGCCAAG |
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NFIC/MA0161.1/Jaspar
Match Rank: | 5 |
Score: | 0.63 |
Offset: | 8 |
Orientation: | reverse strand |
Alignment: | TGGCARTSWGCCA- --------TGCCAA |
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NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 6 |
Score: | 0.60 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TGGCARTSWGCCA CTTGGCAA------- |
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Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer
Match Rank: | 7 |
Score: | 0.59 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---TGGCARTSWGCCA GTAGGTCACTGGGTCA |
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NFIA/MA0670.1/Jaspar
Match Rank: | 8 |
Score: | 0.58 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TGGCARTSWGCCA NNTTGGCANN------ |
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RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer
Match Rank: | 9 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TGGCARTSWGCCA---- GGGRAARRGRMCAGMTG |
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PB0149.1_Myb_2/Jaspar
Match Rank: | 10 |
Score: | 0.57 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TGGCARTSWGCCA NNNTGGCAGTTGGTNN |
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