Information for 10-CAWGATGAAT (Motif 16)

A G T C C G T A G C A T A C T G T G C A A C G T A C T G C G T A G T C A A C G T
Reverse Opposite:
C G T A A C G T A C G T A G T C C G T A A C G T A G T C C G T A C G A T A C T G
p-value:1e-4
log p-value:-1.148e+01
Information Content per bp:1.883
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif27.5
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets57.9 +/- 30.8bp
Average Position of motif in Background49.1 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CAWGATGAAT---
-ATGATKGATGRC
 A G T C C G T A G C A T A C T G T G C A A C G T A C T G C G T A G T C A A C G T A C G T A C G T A C G T
A C G T C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

PB0178.1_Sox8_2/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CAWGATGAAT--
NNTNTCATGAATGT
 A C G T A C G T A G T C C G T A G C A T A C T G T G C A A C G T A C T G C G T A G T C A A C G T A C G T A C G T
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CAWGATGAAT--
--TGCTGACTCA
 A G T C C G T A G C A T A C T G T G C A A C G T A C T G C G T A G T C A A C G T A C G T A C G T
A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CAWGATGAAT--
--TGCTGAGTCA
 A G T C C G T A G C A T A C T G T G C A A C G T A C T G C G T A G T C A A C G T A C G T A C G T
A C G T A C G T C G A T T A C G T G A C G A C T C A T G C G T A T A C G A C G T G T A C C T G A

Mafb/MA0117.2/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CAWGATGAAT
AAAATGCTGACT
 A C G T A C G T A G T C C G T A G C A T A C T G T G C A A C G T A C T G C G T A G T C A A C G T
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CAWGATGAAT
CCTGCTGAGH
 A G T C C G T A G C A T A C T G T G C A A C G T A C T G C G T A G T C A A C G T
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

MAFF/MA0495.1/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CAWGATGAAT----
NAAAANTGCTGACTCAGC
 A C G T A C G T A C G T A C G T A G T C C G T A G C A T A C T G T G C A A C G T A C T G C G T A G T C A A C G T A C G T A C G T A C G T A C G T
C G T A C T G A C G T A C G T A C G T A G C A T G C A T C T A G G T A C C G A T A C T G C G T A A T G C G C A T G A T C C G T A C A T G T A G C

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CAWGATGAAT----
----ATGAATATTC
 A G T C C G T A G C A T A C T G T G C A A C G T A C T G C G T A G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

MAFK/MA0496.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CAWGATGAAT---
AAANTGCTGACTNAG
 A C G T A C G T A G T C C G T A G C A T A C T G T G C A A C G T A C T G C G T A G T C A A C G T A C G T A C G T A C G T
C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CAWGATGAAT----
--TGATTRATGGCY
 A G T C C G T A G C A T A C T G T G C A A C G T A C T G C G T A G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C T A G T C G A A G C T C G A T C T G A C G T A A G C T A C T G C T A G A T G C G A T C