Information for 8-TCATAAAATA (Motif 12)

A C G T A G T C C G T A A C G T C G T A C G T A C G T A C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T A C G T A C G T A C G T C G T A A C G T A C T G G T C A
p-value:1e-7
log p-value:-1.663e+01
Information Content per bp:1.966
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif12.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets45.2 +/- 25.9bp
Average Position of motif in Background59.2 +/- 20.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXC10/MA0905.1/Jaspar

Match Rank:1
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-TCATAAAATA
GTCGTAAAAT-
 A C G T A C G T A G T C C G T A A C G T C G T A C G T A C G T A C G T A A C G T C G T A
T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:2
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-TCATAAAATA
GTCATAAAAN-
 A C G T A C G T A G T C C G T A A C G T C G T A C G T A C G T A C G T A A C G T C G T A
T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T A C G T

PH0068.1_Hoxc13/Jaspar

Match Rank:3
Score:0.76
Offset:-5
Orientation:forward strand
Alignment:-----TCATAAAATA-
AAAGCTCGTAAAATTT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A C G T A C G T A A C G T C G T A A C G T
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--TCATAAAATA
NCYAATAAAA--
 A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A C G T A C G T A A C G T C G T A
C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:5
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--TCATAAAATA
NGYCATAAAWCH
 A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A C G T A C G T A A C G T C G T A
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A

CDX1/MA0878.1/Jaspar

Match Rank:6
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-TCATAAAATA
GCAATAAAA--
 A C G T A C G T A G T C C G T A A C G T C G T A C G T A C G T A C G T A A C G T C G T A
T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A A C G T A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:7
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----TCATAAAATA---
AATGCAATAAAATTTAT
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C G T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

HOXD11/MA0908.1/Jaspar

Match Rank:8
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-TCATAAAATA
GTCGTAAAAA-
 A C G T A C G T A G T C C G T A A C G T C G T A C G T A C G T A C G T A A C G T C G T A
T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A A C G T

CDX2/MA0465.1/Jaspar

Match Rank:9
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---TCATAAAATA
AAGCCATAAAA--
 A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A C G T A C G T A A C G T C G T A
T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:10
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-TCATAAAATA
CCAATAAAAA-
 A C G T A C G T A G T C C G T A A C G T C G T A C G T A C G T A C G T A A C G T C G T A
A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A A C G T