Information for 3-CCGCASGTGACCT (Motif 4)

T A G C A T G C A C T G A T G C C G T A A T C G A T C G A C G T A C T G C T G A A G T C A T G C A C G T
Reverse Opposite:
G T C A A T C G A C T G A G C T A G T C C G T A A T G C A T G C A C G T A T C G A G T C A T C G A T C G
p-value:1e-13
log p-value:-3.083e+01
Information Content per bp:1.795
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif12.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets48.4 +/- 26.8bp
Average Position of motif in Background54.9 +/- 41.7bp
Strand Bias (log2 ratio + to - strand density)-3.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

USF1/MA0093.2/Jaspar

Match Rank:1
Score:0.77
Offset:1
Orientation:forward strand
Alignment:CCGCASGTGACCT
-GCCACGTGACC-
 T A G C A T G C A C T G A T G C C G T A A T C G A T C G A C G T A C T G C T G A A G T C A T G C A C G T
A C G T T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C A C G T

Arntl/MA0603.1/Jaspar

Match Rank:2
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:CCGCASGTGACCT
--NCACGTGACN-
 T A G C A T G C A C T G A T G C C G T A A T C G A T C G A C G T A C T G C T G A A G T C A T G C A C G T
A C G T A C G T C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C A C G T

HEY2/MA0649.1/Jaspar

Match Rank:3
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:CCGCASGTGACCT
-GGCACGTGNC--
 T A G C A T G C A C T G A T G C C G T A A T C G A T C G A C G T A C T G C T G A A G T C A T G C A C G T
A C G T A T C G T C A G T A G C C T G A A T G C A C T G A G C T A C T G A G C T G A T C A C G T A C G T

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:CCGCASGTGACCT
--TCACGTGACC-
 T A G C A T G C A C T G A T G C C G T A A T C G A T C G A C G T A C T G C T G A A G T C A T G C A C G T
A C G T A C G T A G C T A G T C G T C A A G T C C T A G A C G T A T C G T C G A A G T C A T G C A C G T

USF2/MA0526.1/Jaspar

Match Rank:5
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CCGCASGTGACCT
-GTCATGTGACC-
 T A G C A T G C A C T G A T G C C G T A A T C G A T C G A C G T A C T G C T G A A G T C A T G C A C G T
A C G T T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C A C G T

Id2/MA0617.1/Jaspar

Match Rank:6
Score:0.72
Offset:2
Orientation:forward strand
Alignment:CCGCASGTGACCT
--GCACGTGA---
 T A G C A T G C A C T G A T G C C G T A A T C G A T C G A C G T A C T G C T G A A G T C A T G C A C G T
A C G T A C G T T C A G A G T C C G T A A G T C A C T G A C G T A C T G C T G A A C G T A C G T A C G T

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.71
Offset:2
Orientation:forward strand
Alignment:CCGCASGTGACCT
--KCACGTGMCN-
 T A G C A T G C A C T G A T G C C G T A A T C G A T C G A C G T A C T G C T G A A G T C A T G C A C G T
A C G T A C G T C A T G G T A C C G T A A G T C C T A G A C G T A C T G G T A C A G T C A G C T A C G T

BHLHE40/MA0464.2/Jaspar

Match Rank:8
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CCGCASGTGACCT
-ATCACGTGAC--
 T A G C A T G C A C T G A T G C C G T A A T C G A T C G A C G T A C T G C T G A A G T C A T G C A C G T
A C G T T G C A C A G T G T A C T G C A G A T C T C A G G A C T A C T G G T C A G A T C A C G T A C G T

E-box(bHLH)/Promoter/Homer

Match Rank:9
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:CCGCASGTGACCT-
--TCACGTGACCGG
 T A G C A T G C A C T G A T G C C G T A A T C G A T C G A C G T A C T G C T G A A G T C A T G C A C G T A C G T
A C G T A C G T A G C T A G T C C G T A A G T C T C A G C G A T A C T G T C G A A T G C T A G C T A C G T A C G

NR4A2/MA0160.1/Jaspar

Match Rank:10
Score:0.70
Offset:6
Orientation:reverse strand
Alignment:CCGCASGTGACCT-
------GTGACCTT
 T A G C A T G C A C T G A T G C C G T A A T C G A T C G A C G T A C T G C T G A A G T C A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T