Information for 14-TTAGACAAAC (Motif 17)

A G C T C G A T C G T A C T A G T C G A G T A C C G T A C T G A C G T A A G T C
Reverse Opposite:
A C T G A C G T A G C T C G A T A C T G A G C T A G T C A C G T G C T A C T G A
p-value:1e-7
log p-value:-1.648e+01
Information Content per bp:1.807
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.56%
Number of Background Sequences with motif103.0
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets39.1 +/- 20.5bp
Average Position of motif in Background45.3 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TTAGACAAAC
BCAGACWA--
 A G C T C G A T C G T A C T A G T C G A G T A C C G T A C T G A C G T A A G T C
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TTAGACAAAC----
AAACAGACAAAGGAAT
 A C G T A C G T A G C T C G A T C G T A C T A G T C G A G T A C C G T A C T G A C G T A A G T C A C G T A C G T A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

PB0016.1_Foxj1_1/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TTAGACAAAC---
AAAGTAAACAAAAATT
 A C G T A C G T A C G T A G C T C G A T C G T A C T A G T C G A G T A C C G T A C T G A C G T A A G T C A C G T A C G T A C G T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

Foxj3/MA0851.1/Jaspar

Match Rank:4
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TTAGACAAAC--
AAAAAGTAAACAAACAC
 A C G T A C G T A C G T A C G T A C G T A G C T C G A T C G T A C T A G T C G A G T A C C G T A C T G A C G T A A G T C A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0017.1_Foxj3_1/Jaspar

Match Rank:5
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TTAGACAAAC--
AAAAAGTAAACAAACAC
 A C G T A C G T A C G T A C G T A C G T A G C T C G A T C G T A C T A G T C G A G T A C C G T A C T G A C G T A A G T C A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

Foxd3/MA0041.1/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TTAGACAAAC----
--AAACAAACATTC
 A G C T C G A T C G T A C T A G T C G A G T A C C G T A C T G A C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

MF0005.1_Forkhead_class/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TTAGACAAAC-
--AAATAAACA
 A G C T C G A T C G T A C T A G T C G A G T A C C G T A C T G A C G T A A G T C A C G T
A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A

SMAD3/MA0795.1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TTAGACAAAC
CGTCTAGACA---
 A C G T A C G T A C G T A G C T C G A T C G T A C T A G T C G A G T A C C G T A C T G A C G T A A G T C
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TTAGACAAAC
GTAAACAAT-
 A G C T C G A T C G T A C T A G T C G A G T A C C G T A C T G A C G T A A G T C
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T

Foxk1/MA0852.1/Jaspar

Match Rank:10
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TTAGACAAAC--
AAAATGTAAACAAACAG
 A C G T A C G T A C G T A C G T A C G T A G C T C G A T C G T A C T A G T C G A G T A C C G T A C T G A C G T A A G T C A C G T A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G