Information for 13-GGCTTGTGCA (Motif 13)

A C T G A C T G A G T C C A G T A G C T A T C G A C G T A C T G A G T C G T C A
Reverse Opposite:
C A G T A C T G G T A C C G T A T A G C T C G A G T C A A C T G T G A C G T A C
p-value:1e-8
log p-value:-1.846e+01
Information Content per bp:1.836
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.93%
Number of Background Sequences with motif141.5
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets42.2 +/- 28.7bp
Average Position of motif in Background45.8 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0044.1_Mtf1_1/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GGCTTGTGCA----
GGGCCGTGTGCAAAAA
 A C G T A C G T A C T G A C T G A G T C C A G T A G C T A T C G A C G T A C T G A G T C G T C A A C G T A C G T A C G T A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

MTF1/MA0863.1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GGCTTGTGCA--
GTGCCGTGTGCAAA
 A C G T A C G T A C T G A C T G A G T C C A G T A G C T A T C G A C G T A C T G A G T C G T C A A C G T A C G T
C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A

CEBPA/MA0102.3/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GGCTTGTGCA--
-NATTGTGCAAT
 A C T G A C T G A G T C C A G T A G C T A T C G A C G T A C T G A G T C G T C A A C G T A C G T
A C G T C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T

HES7/MA0822.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGCTTGTGCA-
TGGCACGTGCCA
 A C G T A C T G A C T G A G T C C A G T A G C T A T C G A C G T A C T G A G T C G T C A A C G T
G A C T T A C G C T A G A G T C C G T A A G T C A C T G A G C T C T A G A G T C A G T C C T G A

PB0104.1_Zscan4_1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGCTTGTGCA-------
TACATGTGCACATAAAA
 A C T G A C T G A G T C C A G T A G C T A T C G A C G T A C T G A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

HES5/MA0821.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGCTTGTGCA-
TGGCACGTGCCG
 A C G T A C T G A C T G A G T C C A G T A G C T A T C G A C G T A C T G A G T C G T C A A C G T
G A C T T C A G T C A G A G T C C T G A A G T C C A T G A G C T A C T G A G T C A G T C C T A G

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GGCTTGTGCA-
-GHATATKCAT
 A C T G A C T G A G T C C A G T A G C T A T C G A C G T A C T G A G T C G T C A A C G T
A C G T C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T

Hes1/MA1099.1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGCTTGTGCA
NNCGCGTGNN
 A C T G A C T G A G T C C A G T A G C T A T C G A C G T A C T G A G T C G T C A
C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C

HEY2/MA0649.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGCTTGTGCA
GACACGTGCC
 A C T G A C T G A G T C C A G T A G C T A T C G A C G T A C T G A G T C G T C A
C T A G T C G A T G A C C T G A G T A C T A C G G A C T A T C G A G T C T A G C

PB0026.1_Gm397_1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGCTTGTGCA-------
CAGATGTGCACATACGT
 A C T G A C T G A G T C C A G T A G C T A T C G A C G T A C T G A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T