Information for 3-TGCATGTGAC (Motif 8)

G A C T T A C G G T A C T C G A G A C T T C A G A G C T A C T G G T C A A G T C
Reverse Opposite:
T C A G A C G T T G A C T C G A A G T C C T G A A G C T C A T G A T G C C T G A
p-value:1e-12
log p-value:-2.862e+01
Information Content per bp:1.653
Number of Target Sequences with motif53.0
Percentage of Target Sequences with motif7.89%
Number of Background Sequences with motif982.2
Percentage of Background Sequences with motif2.47%
Average Position of motif in Targets48.5 +/- 25.5bp
Average Position of motif in Background51.0 +/- 43.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.30
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

USF2/MA0526.1/Jaspar

Match Rank:1
Score:0.77
Offset:0
Orientation:forward strand
Alignment:TGCATGTGAC-
GTCATGTGACC
 G A C T T A C G G T A C T C G A G A C T T C A G A G C T A C T G G T C A A G T C A C G T
T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:2
Score:0.77
Offset:0
Orientation:forward strand
Alignment:TGCATGTGAC
RTCATGTGAC
 G A C T T A C G G T A C T C G A G A C T T C A G A G C T A C T G G T C A A G T C
T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C

Arntl/MA0603.1/Jaspar

Match Rank:3
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:TGCATGTGAC-
-NCACGTGACN
 G A C T T A C G G T A C T C G A G A C T T C A G A G C T A C T G G T C A A G T C A C G T
A C G T C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C

USF1/MA0093.2/Jaspar

Match Rank:4
Score:0.76
Offset:0
Orientation:forward strand
Alignment:TGCATGTGAC-
GCCACGTGACC
 G A C T T A C G G T A C T C G A G A C T T C A G A G C T A C T G G T C A A G T C A C G T
T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:5
Score:0.74
Offset:0
Orientation:forward strand
Alignment:TGCATGTGAC
KCCACGTGAC
 G A C T T A C G G T A C T C G A G A C T T C A G A G C T A C T G G T C A A G T C
A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:6
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TGCATGTGAC
ACCACGTGAC
 G A C T T A C G G T A C T C G A G A C T T C A G A G C T A C T G G T C A A G T C
T C G A G A T C A G T C C G T A A G T C T C A G A G C T A C T G T G C A A G T C

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.73
Offset:1
Orientation:forward strand
Alignment:TGCATGTGAC-
-KCACGTGMCN
 G A C T T A C G G T A C T C G A G A C T T C A G A G C T A C T G G T C A A G T C A C G T
A C G T C A T G G T A C C G T A A G T C C T A G A C G T A C T G G T A C A G T C A G C T

Id2/MA0617.1/Jaspar

Match Rank:8
Score:0.72
Offset:1
Orientation:forward strand
Alignment:TGCATGTGAC
-GCACGTGA-
 G A C T T A C G G T A C T C G A G A C T T C A G A G C T A C T G G T C A A G T C
A C G T T C A G A G T C C G T A A G T C A C T G A C G T A C T G C T G A A C G T

Mitf/MA0620.1/Jaspar

Match Rank:9
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TGCATGTGAC-
-NCACGTGACN
 G A C T T A C G G T A C T C G A G A C T T C A G A G C T A C T G G T C A A G T C A C G T
A C G T A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:TGCATGTGAC
--CACGTGDC
 G A C T T A C G G T A C T C G A G A C T T C A G A G C T A C T G G T C A A G T C
A C G T A C G T G A T C C T G A A G T C C T A G G C A T C T A G C G T A G A T C