Information for 18-GCGCTGATCC (Motif 37)

A C T G A G T C A C T G A G T C A C G T A C T G C G T A A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A C G T A G T C C G T A A C T G A G T C A C T G A G T C
p-value:1e-3
log p-value:-8.863e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.30%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.0 +/- 24.3bp
Average Position of motif in Background68.4 +/- 9.2bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RHOXF1/MA0719.1/Jaspar

Match Rank:1
Score:0.69
Offset:3
Orientation:forward strand
Alignment:GCGCTGATCC-
---ATAATCCC
 A C T G A G T C A C T G A G T C A C G T A C T G C G T A A C G T A G T C A G T C A C G T
A C G T A C G T A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:2
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GCGCTGATCC
--GCTAATCC
 A C T G A G T C A C T G A G T C A C G T A C T G C G T A A C G T A G T C A G T C
A C G T A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GCGCTGATCC-
-TKCTGTTCCA
 A C T G A G T C A C T G A G T C A C G T A C T G C G T A A C G T A G T C A G T C A C G T
A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A

GSC/MA0648.1/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GCGCTGATCC--
--GCTAATCCCC
 A C T G A G T C A C T G A G T C A C G T A C T G C G T A A C G T A G T C A G T C A C G T A C G T
A C G T A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

PH0139.1_Pitx3/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCGCTGATCC----
GNNAGCTAATCCCCCN
 A C G T A C G T A C T G A G T C A C T G A G T C A C G T A C T G C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T

PH0035.1_Gsc/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCGCTGATCC-----
AATCGTTAATCCCTTTA
 A C G T A C G T A C T G A G T C A C T G A G T C A C G T A C T G C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
G C T A T C G A G C A T G T A C T C A G G A C T C G A T C T G A C G T A A C G T G A T C A G T C A T G C A G C T C A G T G C A T T G A C

NRL/MA0842.1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GCGCTGATCC
AATTTGCTGAC--
 A C G T A C G T A C G T A C T G A G T C A C T G A G T C A C G T A C T G C G T A A C G T A G T C A G T C
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T

PH0015.1_Crx/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCGCTGATCC------
AGGCTAATCCCCAANG
 A C T G A G T C A C T G A G T C A C G T A C T G C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G

PITX3/MA0714.1/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GCGCTGATCC-
--CTTAATCCC
 A C T G A G T C A C T G A G T C A C G T A C T G C G T A A C G T A G T C A G T C A C G T
A C G T A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GCGCTGATCC--
--NYTAATCCYB
 A C T G A G T C A C T G A G T C A C G T A C T G C G T A A C G T A G T C A G T C A C G T A C G T
A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T