p-value: | 1e-6 |
log p-value: | -1.404e+01 |
Information Content per bp: | 1.917 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 0.45% |
Number of Background Sequences with motif | 0.3 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 40.0 +/- 12.6bp |
Average Position of motif in Background | 31.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 10.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0166.1_Sox12_2/Jaspar
Match Rank: | 1 |
Score: | 0.75 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -ATGACACAAAGGA-- AAACAGACAAAGGAAT |
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Sox3/MA0514.1/Jaspar
Match Rank: | 2 |
Score: | 0.68 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | ATGACACAAAGGA --AAAACAAAGG- |
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PH0164.1_Six4/Jaspar
Match Rank: | 3 |
Score: | 0.66 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----ATGACACAAAGGA ATAAATGACACCTATCA |
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PB0168.1_Sox14_2/Jaspar
Match Rank: | 4 |
Score: | 0.65 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | ATGACACAAAGGA-- CTCACACAATGGCGC |
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Sox2/MA0143.3/Jaspar
Match Rank: | 5 |
Score: | 0.65 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | ATGACACAAAGGA ----AACAAAGG- |
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MEIS1/MA0498.2/Jaspar
Match Rank: | 6 |
Score: | 0.63 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | ATGACACAAAGGA TTGACAG------ |
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MAFG::NFE2L1/MA0089.1/Jaspar
Match Rank: | 7 |
Score: | 0.62 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -ATGACACAAAGGA CATGAC-------- |
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Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer
Match Rank: | 8 |
Score: | 0.61 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | ATGACACAAAGGA --VRRACAAWGG- |
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Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer
Match Rank: | 9 |
Score: | 0.61 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | ATGACACAAAGGA ----RACAAWGG- |
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FOS::JUN/MA0099.2/Jaspar
Match Rank: | 10 |
Score: | 0.59 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | ATGACACAAAGGA -TGACTCA----- |
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