Information for 10-CSCRCTCTGYGAT (Motif 21)

A T G C A T G C A G T C C T G A A G T C A C G T A G T C A C G T A C T G A G C T A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C T C A G A G T C C G T A A C T G C G T A C T A G A G C T A C T G T A C G A T C G
p-value:1e-8
log p-value:-1.952e+01
Information Content per bp:1.875
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.8 +/- 31.8bp
Average Position of motif in Background49.5 +/- 16.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0207.1_Zic3_2/Jaspar

Match Rank:1
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CSCRCTCTGYGAT-
NNTCCTGCTGTGNNN
 A C G T A T G C A T G C A G T C C T G A A G T C A C G T A G T C A C G T A C T G A G C T A C T G C G T A A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CSCRCTCTGYGAT-
TCNCCTGCTGNGNNN
 A C G T A T G C A T G C A G T C C T G A A G T C A C G T A G T C A C G T A C T G A G C T A C T G C G T A A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Gfi1/MA0038.1/Jaspar

Match Rank:3
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:CSCRCTCTGYGAT---
------CNGTGATTTN
 A T G C A T G C A G T C C T G A A G T C A C G T A G T C A C G T A C T G A G C T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

PB0114.1_Egr1_2/Jaspar

Match Rank:4
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----CSCRCTCTGYGAT
NNAGTCCCACTCNNNN--
 A C G T A C G T A C G T A C G T A C G T A T G C A T G C A G T C C T G A A G T C A C G T A G T C A C G T A C T G A G C T A C T G C G T A A C G T
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CSCRCTCTGYGAT
--CCTGCTGAGH-
 A T G C A T G C A G T C C T G A A G T C A C G T A G T C A C G T A C T G A G C T A C T G C G T A A C G T
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CSCRCTCTGYGAT
GACCCCCCGCTGCGC-
 A C G T A C G T A C G T A T G C A T G C A G T C C T G A A G T C A C G T A G T C A C G T A C T G A G C T A C T G C G T A A C G T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CSCRCTCTGYGAT
-----GCTGTG--
 A T G C A T G C A G T C C T G A A G T C A C G T A G T C A C G T A C T G A G C T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CSCRCTCTGYGAT
GACCCCCCGCTGTG--
 A C G T A C G T A C G T A T G C A T G C A G T C C T G A A G T C A C G T A G T C A C G T A C T G A G C T A C T G C G T A A C G T
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:9
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CSCRCTCTGYGAT--
----TGCTGTGATTT
 A T G C A T G C A G T C C T G A A G T C A C G T A G T C A C G T A C T G A G C T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CSCRCTCTGYGAT-
TNTCCTGCTGTGNNG
 A C G T A T G C A T G C A G T C C T G A A G T C A C G T A G T C A C G T A C T G A G C T A C T G C G T A A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G