Information for 1-CGCCACCTAGTGG (Motif 1)

A G T C C A T G G T A C A G T C G T C A A G T C G T A C C A G T T C G A A T C G A G C T A C T G C T A G
Reverse Opposite:
A G T C A G T C C T G A T A G C A G C T G C T A A C T G C T A G A C G T A C T G A C T G G T A C C T A G
p-value:1e-29
log p-value:-6.717e+01
Information Content per bp:1.786
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.83%
Number of Background Sequences with motif14.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets51.8 +/- 21.7bp
Average Position of motif in Background51.1 +/- 19.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF/MA0139.1/Jaspar

Match Rank:1
Score:0.88
Offset:-3
Orientation:reverse strand
Alignment:---CGCCACCTAGTGG---
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A G T C C A T G G T A C A G T C G T C A A G T C G T A C C A G T T C G A A T C G A G C T A C T G C T A G A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.88
Offset:-4
Orientation:forward strand
Alignment:----CGCCACCTAGTGG---
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A G T C C A T G G T A C A G T C G T C A A G T C G T A C C A G T T C G A A T C G A G C T A C T G C T A G A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.86
Offset:-6
Orientation:forward strand
Alignment:------CGCCACCTAGTGG-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C A T G G T A C A G T C G T C A A G T C G T A C C A G T T C G A A T C G A G C T A C T G C T A G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGCCACCTAGTGG
TGACACCT-----
 A G T C C A T G G T A C A G T C G T C A A G T C G T A C C A G T T C G A A T C G A G C T A C T G C T A G
G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:5
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CGCCACCTAGTGG
GGTCCCGCCCCCTTCTC-
 A C G T A C G T A C G T A C G T A C G T A G T C C A T G G T A C A G T C G T C A A G T C G T A C C A G T T C G A A T C G A G C T A C T G C T A G
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CGCCACCTAGTGG
-ACCACCTGTT--
 A G T C C A T G G T A C A G T C G T C A A G T C G T A C C A G T T C G A A T C G A G C T A C T G C T A G
A C G T G C T A G T A C A G T C G T C A A T G C T A G C C G A T C A T G A C G T C G A T A C G T A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CGCCACCTAGTGG--
--CCACCTGTTGCAT
 A G T C C A T G G T A C A G T C G T C A A G T C G T A C C A G T T C G A A T C G A G C T A C T G C T A G A C G T A C G T
A C G T A C G T T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CGCCACCTAGTGG
-NNCACCTGNN--
 A G T C C A T G G T A C A G T C G T C A A G T C G T A C C A G T T C G A A T C G A G C T A C T G C T A G
A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CGCCACCTAGTGG--
ANCCACCTGTTGCNC
 A G T C C A T G G T A C A G T C G T C A A G T C G T A C C A G T T C G A A T C G A G C T A C T G C T A G A C G T A C G T
C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C

Znf423/MA0116.1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CGCCACCTAGTGG---
-GGCACCCAGGGGTGC
 A G T C C A T G G T A C A G T C G T C A A G T C G T A C C A G T T C G A A T C G A G C T A C T G C T A G A C G T A C G T A C G T
A C G T T C A G A T C G G T A C G T C A A G T C A G T C G A T C C G T A C T A G A C T G A C T G A C T G A C G T A C T G G T A C