Information for 1-ATTTGACCTC (Motif 9)

G T C A C G A T G A C T A C G T A T C G T G C A A G T C A G T C G C A T A G T C
Reverse Opposite:
T C A G C G T A T A C G T C A G A C G T T A G C C G T A C T G A C G T A C A G T
p-value:1e-11
log p-value:-2.569e+01
Information Content per bp:1.688
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif6.31%
Number of Background Sequences with motif835.9
Percentage of Background Sequences with motif1.74%
Average Position of motif in Targets42.6 +/- 25.7bp
Average Position of motif in Background51.6 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.80
Offset:3
Orientation:reverse strand
Alignment:ATTTGACCTC-
---TGACCTYA
 G T C A C G A T G A C T A C G T A T C G T G C A A G T C A G T C G C A T A G T C A C G T
A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:2
Score:0.79
Offset:3
Orientation:reverse strand
Alignment:ATTTGACCTC-
---TGACCYCT
 G T C A C G A T G A C T A C G T A T C G T G C A A G T C A G T C G C A T A G T C A C G T
A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

NR2F1/MA0017.2/Jaspar

Match Rank:3
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-ATTTGACCTC--
CNNTTGACCTTTG
 A C G T G T C A C G A T G A C T A C G T A T C G T G C A A G T C A G T C G C A T A G T C A C G T A C G T
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:ATTTGACCTC
---TGACCT-
 G T C A C G A T G A C T A C G T A T C G T G C A A G T C A G T C G C A T A G T C
A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:5
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:ATTTGACCTC
--GTGACCTT
 G T C A C G A T G A C T A C G T A T C G T G C A A G T C A G T C G C A T A G T C
A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

RORA/MA0071.1/Jaspar

Match Rank:6
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:ATTTGACCTC---
---TGACCTTGAT
 G T C A C G A T G A C T A C G T A T C G T G C A A G T C A G T C G C A T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:7
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----ATTTGACCTC
TGACCTTTGACCTC
 A C G T A C G T A C G T A C G T G T C A C G A T G A C T A C G T A T C G T G C A A G T C A G T C G C A T A G T C
G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C

PB0030.1_Hnf4a_1/Jaspar

Match Rank:8
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--ATTTGACCTC-----
NNANTTGACCCCTNNNN
 A C G T A C G T G T C A C G A T G A C T A C G T A T C G T G C A A G T C A G T C G C A T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

PB0118.1_Esrra_2/Jaspar

Match Rank:9
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--ATTTGACCTC-----
NNNNTTGACCCCTNNNN
 A C G T A C G T G T C A C G A T G A C T A C G T A T C G T G C A A G T C A G T C G C A T A G T C A C G T A C G T A C G T A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

PB0057.1_Rxra_1/Jaspar

Match Rank:10
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--ATTTGACCTC-----
TGTCGTGACCCCTTAAT
 A C G T A C G T G T C A C G A T G A C T A C G T A T C G T G C A A G T C A G T C G C A T A G T C A C G T A C G T A C G T A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T