Information for 18-CATAAGGGCCAGC (Motif 40)

A G T C C G T A A C G T C G T A C G T A A C T G A C T G A C T G A G T C A G T C C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C T G A C T G A G T C A G T C A G T C A C G T A C G T C G T A A C G T A C T G
p-value:1e-5
log p-value:-1.272e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.3 +/- 15.2bp
Average Position of motif in Background55.1 +/- 33.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0128.1_Gcm1_2/Jaspar

Match Rank:1
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CATAAGGGCCAGC
TGCGCATAGGGGAGGAG
 A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A A C T G A C T G A C T G A G T C A G T C C G T A A C T G A G T C
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G

HLTF/MA0109.1/Jaspar

Match Rank:2
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CATAAGGGCCAGC
NNATAAGGNN----
 A C G T A G T C C G T A A C G T C G T A C G T A A C T G A C T G A C T G A G T C A G T C C G T A A C T G A G T C
C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T A C G T A C G T A C G T A C G T

Neurog1/MA0623.1/Jaspar

Match Rank:3
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CATAAGGGCCAGC
ACCATATGGT-----
 A C G T A C G T A G T C C G T A A C G T C G T A C G T A A C T G A C T G A C T G A G T C A G T C C G T A A C T G A G T C
T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A T C G G A C T A C G T A C G T A C G T A C G T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CATAAGGGCCAGC---
-ATAAGGGCGCGCGAT
 A G T C C G T A A C G T C G T A C G T A A C T G A C T G A C T G A G T C A G T C C G T A A C T G A G T C A C G T A C G T A C G T
A C G T T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:5
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CATAAGGGCCAGC
--YAACBGCC---
 A G T C C G T A A C G T C G T A C G T A A C T G A C T G A C T G A G T C A G T C C G T A A C T G A G T C
A C G T A C G T A G C T C G T A C G T A A G T C A G T C A C T G G A T C G A T C A C G T A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CATAAGGGCCAGC
ACATATGG------
 A C G T A G T C C G T A A C G T C G T A C G T A A C T G A C T G A C T G A G T C A G T C C G T A A C T G A G T C
T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CATAAGGGCCAGC
--TNNGGGCAG--
 A G T C C G T A A C G T C G T A C G T A A C T G A C T G A C T G A G T C A G T C C G T A A C T G A G T C
A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CATAAGGGCCAGC
--CAAAGGTCAG-
 A G T C C G T A A C G T C G T A C G T A A C T G A C T G A C T G A G T C A G T C C G T A A C T G A G T C
A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CATAAGGGCCAGC
CAGATAAGGN-----
 A C G T A C G T A G T C C G T A A C G T C G T A C G T A A C T G A C T G A C T G A G T C A G T C C G T A A C T G A G T C
T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A A C G T A C G T A C G T A C G T A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CATAAGGGCCAGC
-CTAATKGV----
 A G T C C G T A A C G T C G T A C G T A A C T G A C T G A C T G A G T C A G T C C G T A A C T G A G T C
A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T A C G T A C G T A C G T