Information for 3-CTTKGTCCATTGC (Motif 3)

A G T C A G C T A C G T A C T G A C T G A C G T A T G C T A G C T C G A A C G T A C G T A C T G G T A C
Reverse Opposite:
C A T G A G T C T C G A T G C A A C G T A C T G A T C G T C G A G T A C G T A C T G C A C T G A A C T G
p-value:1e-11
log p-value:-2.738e+01
Information Content per bp:1.707
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.90%
Number of Background Sequences with motif27.7
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets50.8 +/- 25.1bp
Average Position of motif in Background47.2 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CTTKGTCCATTGC
YCTTTGTTCC----
 A C G T A G T C A G C T A C G T A C T G A C T G A C G T A T G C T A G C T C G A A C G T A C G T A C T G G T A C
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CTTKGTCCATTGC
ANTCCTTTGTCTNNNN-
 A C G T A C G T A C G T A C G T A G T C A G C T A C G T A C T G A C T G A C G T A T G C T A G C T C G A A C G T A C G T A C T G G T A C
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CTTKGTCCATTGC
GAGCCCTTGTCCCTAA-
 A C G T A C G T A C G T A C G T A G T C A G C T A C G T A C T G A C T G A C G T A T G C T A G C T C G A A C G T A C G T A C T G G T A C
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G A C G T

SOX10/MA0442.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTTKGTCCATTGC
CTTTGT-------
 A G T C A G C T A C G T A C T G A C T G A C G T A T G C T A G C T C G A A C G T A C G T A C T G G T A C
A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTTKGTCCATTGC
CCWTTGTYYB----
 A C G T A G T C A G C T A C G T A C T G A C T G A C G T A T G C T A G C T C G A A C G T A C G T A C T G G T A C
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTTKGTCCATTGC
CCTTTGTT------
 A C G T A G T C A G C T A C G T A C T G A C T G A C G T A T G C T A G C T C G A A C G T A C G T A C T G G T A C
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CTTKGTCCATTGC
-ATTTTCCATT--
 A G T C A G C T A C G T A C T G A C T G A C G T A T G C T A G C T C G A A C G T A C G T A C T G G T A C
A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:8
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------CTTKGTCCATTGC
AGGVNCCTTTGT-------
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G C T A C G T A C T G A C T G A C G T A T G C T A G C T C G A A C G T A C G T A C T G G T A C
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTTKGTCCATTGC
CCTTTGTTTT----
 A C G T A G T C A G C T A C G T A C T G A C T G A C G T A T G C T A G C T C G A A C G T A C G T A C T G G T A C
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:10
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CTTKGTCCATTGC
TGGACTTTGNNCTNTG-
 A C G T A C G T A C G T A C G T A G T C A G C T A C G T A C T G A C T G A C G T A T G C T A G C T C G A A C G T A C G T A C T G G T A C
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G A C G T