Information for 12-GGGCAAGGGGACA (Motif 25)

A C T G A C T G C T A G G T A C C G T A G C T A A C T G A C T G A C T G A C T G G T C A G T A C C G T A
Reverse Opposite:
A C G T A C T G A C G T A G T C A G T C A G T C G T A C C A G T A C G T A C T G G A T C A G T C G T A C
p-value:1e-7
log p-value:-1.758e+01
Information Content per bp:1.819
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif7.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets50.2 +/- 31.6bp
Average Position of motif in Background29.4 +/- 16.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:1
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---GGGCAAGGGGACA
GTAGGTCACTGGGTCA
 A C G T A C G T A C G T A C T G A C T G C T A G G T A C C G T A G C T A A C T G A C T G A C T G A C T G G T C A G T A C C G T A
A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A

PB0132.1_Hbp1_2/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GGGCAAGGGGACA-
NNTNNACAATGGGANNN
 A C G T A C G T A C G T A C T G A C T G C T A G G T A C C G T A G C T A A C T G A C T G A C T G A C T G G T C A G T A C C G T A A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGGCAAGGGGACA
GAGGTCAAAAGGTCA
 A C G T A C G T A C T G A C T G C T A G G T A C C G T A G C T A A C T G A C T G A C T G A C T G G T C A G T A C C G T A
T C A G C T G A A C T G C T A G A C G T A G T C G T C A C G T A C T G A C G T A A C T G A C T G C G A T A G T C C T G A

MZF1/MA0056.1/Jaspar

Match Rank:4
Score:0.62
Offset:5
Orientation:forward strand
Alignment:GGGCAAGGGGACA
-----TGGGGA--
 A C T G A C T G C T A G G T A C C G T A G C T A A C T G A C T G A C T G A C T G G T C A G T A C C G T A
A C G T A C G T A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGGCAAGGGGACA-----
-GGCGAGGGGTCAAGGGC
 A C T G A C T G C T A G G T A C C G T A G C T A A C T G A C T G A C T G A C T G G T C A G T A C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGGCAAGGGGACA
AGGTCAAGGTCA--
 A C G T A C T G A C T G C T A G G T A C C G T A G C T A A C T G A C T G A C T G A C T G G T C A G T A C C G T A
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGGCAAGGGGACA
AGGTCAAGGTCA--
 A C G T A C T G A C T G C T A G G T A C C G T A G C T A A C T G A C T G A C T G A C T G G T C A G T A C C G T A
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGGCAAGGGGACA-----
-NTNNNGGGGTCANGNNN
 A C T G A C T G C T A G G T A C C G T A G C T A A C T G A C T G A C T G A C T G G T C A G T A C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GGGCAAGGGGACA
GTAGGGCAAAGGTCA-
 A C G T A C G T A C G T A C T G A C T G C T A G G T A C C G T A G C T A A C T G A C T G A C T G A C T G G T C A G T A C C G T A
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGGCAAGGGGACA
TAGGGCAAAGGTCA-
 A C G T A C G T A C T G A C T G C T A G G T A C C G T A G C T A A C T G A C T G A C T G A C T G G T C A G T A C C G T A
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T