Information for 5-GACAGAGTGG (Motif 24)

A T C G T G C A A G T C C G T A A T C G G C T A A C T G C G A T C T A G A T C G
Reverse Opposite:
A T G C A G T C C G T A A G T C C G A T A T G C C G A T A C T G A C G T A T G C
p-value:1e-7
log p-value:-1.779e+01
Information Content per bp:1.841
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif3.42%
Number of Background Sequences with motif302.8
Percentage of Background Sequences with motif0.65%
Average Position of motif in Targets55.0 +/- 20.6bp
Average Position of motif in Background47.9 +/- 34.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1/MA0498.2/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GACAGAGTGG
TTGACAG-----
 A C G T A C G T A T C G T G C A A G T C C G T A A T C G G C T A A C T G C G A T C T A G A T C G
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T

GLI2/MA0734.1/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GACAGAGTGG----
--CAGTGTGGTCGC
 A T C G T G C A A G T C C G T A A T C G G C T A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C

MEIS2/MA0774.1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GACAGAGTGG
TTGACAGC----
 A C G T A C G T A T C G T G C A A G T C C G T A A T C G G C T A A C T G C G A T C T A G A T C G
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GACAGAGTGG
TTGACAGG----
 A C G T A C G T A T C G T G C A A G T C C G T A A T C G G C T A A C T G C G A T C T A G A T C G
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GACAGAGTGG
CACAGN----
 A T C G T G C A A G T C C G T A A T C G G C T A A C T G C G A T C T A G A T C G
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GACAGAGTGG--
--TTRAGTGSYK
 A T C G T G C A A G T C C G T A A T C G G C T A A C T G C G A T C T A G A T C G A C G T A C G T
A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

ZNF354C/MA0130.1/Jaspar

Match Rank:7
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:GACAGAGTGG--
------GTGGAT
 A T C G T G C A A G T C C G T A A T C G G C T A A C T G C G A T C T A G A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GACAGAGTGG------
TGCGGAGTGGGACTGG
 A T C G T G C A A G T C C G T A A T C G G C T A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

SOX10/MA0442.1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GACAGAGTGG
-ACAAAG---
 A T C G T G C A A G T C C G T A A T C G G C T A A C T G C G A T C T A G A T C G
A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GACAGAGTGG
VBTGWCAGCB---
 A C G T A C G T A C G T A T C G T G C A A G T C C G T A A T C G G C T A A C T G C G A T C T A G A T C G
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T