Information for 9-CTCAATATTTGAT (Motif 12)

A T G C A C G T A T G C G T C A C G T A A C G T T C G A A C G T A C G T A C G T A C T G C T G A A C G T
Reverse Opposite:
C G T A A G C T A G T C C G T A C G T A C G T A A C G T C G T A C G A T A C G T A T C G C G T A A T C G
p-value:1e-11
log p-value:-2.650e+01
Information Content per bp:1.818
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif8.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets59.4 +/- 28.7bp
Average Position of motif in Background43.6 +/- 22.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU4F1/MA0790.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CTCAATATTTGAT-
ATGAATAATTAATG
 A T G C A C G T A T G C G T C A C G T A A C G T T C G A A C G T A C G T A C G T A C T G C T G A A C G T A C G T
T C G A G A C T C T A G G T C A G C T A C G A T C G T A C G T A C G A T C G A T C G T A T C G A G A C T C A T G

Arid3a/MA0151.1/Jaspar

Match Rank:2
Score:0.66
Offset:7
Orientation:reverse strand
Alignment:CTCAATATTTGAT
-------TTTAAT
 A T G C A C G T A T G C G T C A C G T A A C G T T C G A A C G T A C G T A C G T A C T G C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T

POU4F3/MA0791.1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CTCAATATTTGAT---
ATGCATAATTAATGAG
 A T G C A C G T A T G C G T C A C G T A A C G T T C G A A C G T A C G T A C G T A C T G C T G A A C G T A C G T A C G T A C G T
C T G A A G C T C A T G G T A C G C T A C G A T C G T A C G T A C G A T C G A T C G T A C T G A G A C T C A T G G T C A T C A G

PH0152.1_Pou6f1_2/Jaspar

Match Rank:4
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----CTCAATATTTGAT
GCAACCTCATTATNNNN-
 A C G T A C G T A C G T A C G T A C G T A T G C A C G T A T G C G T C A C G T A A C G T T C G A A C G T A C G T A C G T A C T G C T G A A C G T
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CTCAATATTTGAT
NNTNNCAATATTAG--
 A C G T A C G T A C G T A T G C A C G T A T G C G T C A C G T A A C G T T C G A A C G T A C G T A C G T A C T G C T G A A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CTCAATATTTGAT
NNTNNCAATATTAG--
 A C G T A C G T A C G T A T G C A C G T A T G C G T C A C G T A A C G T T C G A A C G T A C G T A C G T A C T G C T G A A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CTCAATATTTGAT-
--GAATGTTTGTTT
 A T G C A C G T A T G C G T C A C G T A A C G T T C G A A C G T A C G T A C G T A C T G C T G A A C G T A C G T
A C G T A C G T C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T

POU4F2/MA0683.1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTCAATATTTGAT---
ATGCATAATTAATGAG
 A T G C A C G T A T G C G T C A C G T A A C G T T C G A A C G T A C G T A C G T A C T G C T G A A C G T A C G T A C G T A C G T
C T G A G A C T C T A G G T A C G C T A C G A T C G T A G C T A G C A T G C A T C T G A T C G A A C G T A C T G C T G A T C A G

POU6F2/MA0793.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CTCAATATTTGAT
AGCTCATTAT-----
 A C G T A C G T A T G C A C G T A T G C G T C A C G T A A C G T T C G A A C G T A C G T A C G T A C T G C T G A A C G T
C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T A C G T A C G T A C G T A C G T A C G T

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTCAATATTTGAT-
-TTAATGTTTAACC
 A T G C A C G T A T G C G T C A C G T A A C G T T C G A A C G T A C G T A C G T A C T G C T G A A C G T A C G T
A C G T A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C