Information for 8-CAGGGCAGGGSTY (Motif 11)

T G A C C T G A A C T G C T A G A T C G A G T C C T G A T C A G C T A G A C T G T A C G G A C T G A C T
Reverse Opposite:
C T G A C T G A A T G C A G T C A G T C A G T C A G C T A C T G T A G C A G T C A G T C A G C T A C T G
p-value:1e-11
log p-value:-2.664e+01
Information Content per bp:1.693
Number of Target Sequences with motif49.0
Percentage of Target Sequences with motif5.93%
Number of Background Sequences with motif873.6
Percentage of Background Sequences with motif1.85%
Average Position of motif in Targets57.0 +/- 25.8bp
Average Position of motif in Background49.7 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CAGGGCAGGGSTY-
TAGGGCAAAGGTCA
 T G A C C T G A A C T G C T A G A T C G A G T C C T G A T C A G C T A G A C T G T A C G G A C T G A C T A C G T
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CAGGGCAGGGSTY-
GTAGGGCAAAGGTCA
 A C G T T G A C C T G A A C T G C T A G A T C G A G T C C T G A T C A G C T A G A C T G T A C G G A C T G A C T A C G T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

NR2C2/MA0504.1/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CAGGGCAGGGSTY-
AGGGGTCAGAGGTCA
 A C G T T G A C C T G A A C T G C T A G A T C G A G T C C T G A T C A G C T A G A C T G T A C G G A C T G A C T A C G T
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

Sp1(Zf)/Promoter/Homer

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CAGGGCAGGGSTY
GGGGGCGGGGCC-
 T G A C C T G A A C T G C T A G A T C G A G T C C T G A T C A G C T A G A C T G T A C G G A C T G A C T
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:5
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CAGGGCAGGGSTY
-AGGTCAAGGTCA
 T G A C C T G A A C T G C T A G A T C G A G T C C T G A T C A G C T A G A C T G T A C G G A C T G A C T
A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CAGGGCAGGGSTY-
TGGGGCAAAGGTCA
 T G A C C T G A A C T G C T A G A T C G A G T C C T G A T C A G C T A G A C T G T A C G G A C T G A C T A C G T
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

POL003.1_GC-box/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CAGGGCAGGGSTY
AGGGGGCGGGGCTG
 A C G T T G A C C T G A A C T G C T A G A T C G A G T C C T G A T C A G C T A G A C T G T A C G G A C T G A C T
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:8
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CAGGGCAGGGSTY
-AGGTCAAGGTCA
 T G A C C T G A A C T G C T A G A T C G A G T C C T G A T C A G C T A G A C T G T A C G G A C T G A C T
A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:9
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CAGGGCAGGGSTY-
GAGGTCAAAGGTCA
 T G A C C T G A A C T G C T A G A T C G A G T C C T G A T C A G C T A G A C T G T A C G G A C T G A C T A C G T
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

KLF5/MA0599.1/Jaspar

Match Rank:10
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CAGGGCAGGGSTY
-GGGGNGGGGC--
 T G A C C T G A A C T G C T A G A T C G A G T C C T G A T C A G C T A G A C T G T A C G G A C T G A C T
A C G T C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C A C G T A C G T