Information for 4-GCAAAACCAAACA (Motif 8)

T A C G A T G C G T C A C T G A C G T A G T C A G T A C G T A C C G T A C G T A C G T A T G A C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C G T A C G T A C T G A C T G A C G T C G A T A G C T A C G T A T C G A G T C
p-value:1e-11
log p-value:-2.665e+01
Information Content per bp:1.795
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif2.20%
Number of Background Sequences with motif65.2
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets56.8 +/- 22.5bp
Average Position of motif in Background44.4 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GCAAAACCAAACA
---AAACCACANN
 T A C G A T G C G T C A C T G A C G T A G T C A G T A C G T A C C G T A C G T A C G T A T G A C C G T A
A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GCAAAACCAAACA-
---AAACCACAGAN
 T A C G A T G C G T C A C T G A C G T A G T C A G T A C G T A C C G T A C G T A C G T A T G A C C G T A A C G T
A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GCAAAACCAAACA--
TGCCAAAATAAACANN
 A C G T T A C G A T G C G T C A C T G A C G T A G T C A G T A C G T A C C G T A C G T A C G T A T G A C C G T A A C G T A C G T
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GCAAAACCAAACA-----
-CAAATCCAGACATCACA
 T A C G A T G C G T C A C T G A C G T A G T C A G T A C G T A C C G T A C G T A C G T A T G A C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GCAAAACCAAACA-
--NWAACCACADNN
 T A C G A T G C G T C A C T G A C G T A G T C A G T A C G T A C C G T A C G T A C G T A T G A C C G T A A C G T
A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GCAAAACCAAACA
--NAAACCACAG-
 T A C G A T G C G T C A C T G A C G T A G T C A G T A C G T A C C G T A C G T A C G T A T G A C C G T A
A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GCAAAACCAAACA
---AAACCACAGC
 T A C G A T G C G T C A C T G A C G T A G T C A G T A C G T A C C G T A C G T A C G T A T G A C C G T A
A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX3/MA0684.1/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GCAAAACCAAACA
---AAACCGCAAA
 T A C G A T G C G T C A C T G A C G T A G T C A G T A C G T A C C G T A C G T A C G T A T G A C C G T A
A C G T A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

PB0123.1_Foxl1_2/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCAAAACCAAACA
ATATCAAAACAAAACA
 A C G T A C G T A C G T T A C G A T G C G T C A C T G A C G T A G T C A G T A C G T A C C G T A C G T A C G T A T G A C C G T A
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

PB0121.1_Foxj3_2/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCAAAACCAAACA-----
-AACACCAAAACAAAGGA
 T A C G A T G C G T C A C T G A C G T A G T C A G T A C G T A C C G T A C G T A C G T A T G A C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A