Information for 2-CCCCGGTGAAGGCAGC (Motif 3)

A G T C A G T C A G T C T G A C C T A G A T C G A C G T A C T G C G T A G C T A C T A G A T C G T A G C C G T A T C A G T A G C
Reverse Opposite:
A C T G A G T C C G A T A T C G A T G C A G T C C A G T G A C T T A G C G T C A A T G C G A T C A C T G T C A G C T A G C T A G
p-value:1e-11
log p-value:-2.698e+01
Information Content per bp:1.674
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.36%
Number of Background Sequences with motif79.1
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets57.2 +/- 18.4bp
Average Position of motif in Background49.7 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.51
Offset:4
Orientation:forward strand
Alignment:CCCCGGTGAAGGCAGC--
----GGAGAAAGGTGCGA
 A G T C A G T C A G T C T G A C C T A G A T C G A C G T A C T G C G T A G C T A C T A G A T C G T A G C C G T A T C A G T A G C A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CCCCGGTGAAGGCAGC
NNCAGGTGNN------
 A G T C A G T C A G T C T G A C C T A G A T C G A C G T A C T G C G T A G C T A C T A G A T C G T A G C C G T A T C A G T A G C
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T A C G T A C G T A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:3
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CCCCGGTGAAGGCAGC
NGTCCCNNGGGA-------
 A C G T A C G T A C G T A G T C A G T C A G T C T G A C C T A G A T C G A C G T A C T G C G T A G C T A C T A G A T C G T A G C C G T A T C A G T A G C
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:4
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CCCCGGTGAAGGCAGC
--CAGGTGAGG-----
 A G T C A G T C A G T C T G A C C T A G A T C G A C G T A C T G C G T A G C T A C T A G A T C G T A G C C G T A T C A G T A G C
A C G T A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T A C G T A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:5
Score:0.50
Offset:1
Orientation:forward strand
Alignment:CCCCGGTGAAGGCAGC
-VCAGGTRDRY-----
 A G T C A G T C A G T C T G A C C T A G A T C G A C G T A C T G C G T A G C T A C T A G A T C G T A G C C G T A T C A G T A G C
A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C A C G T A C G T A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CCCCGGTGAAGGCAGC
TCCCCTGGGGAC-----
 A C G T A G T C A G T C A G T C T G A C C T A G A T C G A C G T A C T G C G T A G C T A C T A G A T C G T A G C C G T A T C A G T A G C
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C A C G T A C G T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:7
Score:0.50
Offset:3
Orientation:forward strand
Alignment:CCCCGGTGAAGGCAGC
---AGGTCAAGGTCA-
 A G T C A G T C A G T C T G A C C T A G A T C G A C G T A C T G C G T A G C T A C T A G A T C G T A G C C G T A T C A G T A G C
A C G T A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A A C G T

CRE(bZIP)/Promoter/Homer

Match Rank:8
Score:0.49
Offset:3
Orientation:forward strand
Alignment:CCCCGGTGAAGGCAGC
---CGGTGACGTCAC-
 A G T C A G T C A G T C T G A C C T A G A T C G A C G T A C T G C G T A G C T A C T A G A T C G T A G C C G T A T C A G T A G C
A C G T A C G T A C G T A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:9
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---CCCCGGTGAAGGCAGC
CCCCCCCGGGGGGGT----
 A C G T A C G T A C G T A G T C A G T C A G T C T G A C C T A G A T C G A C G T A C T G C G T A G C T A C T A G A T C G T A G C C G T A T C A G T A G C
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T A C G T A C G T A C G T A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:10
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CCCCGGTGAAGGCAGC
AACAGGTGNT------
 A G T C A G T C A G T C T G A C C T A G A T C G A C G T A C T G C G T A G C T A C T A G A T C G T A G C C G T A T C A G T A G C
G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T A C G T A C G T A C G T A C G T A C G T A C G T