Information for 7-GGCTTTTGTC (Motif 21)

C T A G A C T G A G T C A G C T A G C T C G A T G C A T T C A G A G C T G T A C
Reverse Opposite:
C A T G T C G A A G T C C G T A G C T A C T G A T C G A T C A G T G A C G A T C
p-value:1e-5
log p-value:-1.265e+01
Information Content per bp:1.609
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif8.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets53.8 +/- 15.2bp
Average Position of motif in Background46.9 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox3/MA0514.1/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GGCTTTTGTC--
--CCTTTGTTTT
 C T A G A C T G A G T C A G C T A G C T C G A T G C A T T C A G A G C T G T A C A C G T A C G T
A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GGCTTTTGTC
--CCWTTGTY
 C T A G A C T G A G T C A G C T A G C T C G A T G C A T T C A G A G C T G T A C
A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGCTTTTGTC
NGCTN-----
 C T A G A C T G A G T C A G C T A G C T C G A T G C A T T C A G A G C T G T A C
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T

PB0032.1_IRC900814_1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGCTTTTGTC------
GNNATTTGTCGTAANN
 C T A G A C T G A G T C A G C T A G C T C G A T G C A T T C A G A G C T G T A C A C G T A C G T A C G T A C G T A C G T A C G T
T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GGCTTTTGTC-
-NCCATTGTTY
 C T A G A C T G A G T C A G C T A G C T C G A T G C A T T C A G A G C T G T A C A C G T
A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T

RHOXF1/MA0719.1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GGCTTTTGTC
NGGATTAN---
 A C G T C T A G A C T G A G T C A G C T A G C T C G A T G C A T T C A G A G C T G T A C
C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GGCTTTTGTC
--CCTTTGTT
 C T A G A C T G A G T C A G C T A G C T C G A T G C A T T C A G A G C T G T A C
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GGCTTTTGTC-
GYCTGGYYTNTGTCA
 A C G T A C G T A C G T A C G T C T A G A C T G A G T C A G C T A G C T C G A T G C A T T C A G A G C T G T A C A C G T
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

GATA3/MA0037.2/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GGCTTTTGTC-
---TCTTATCT
 C T A G A C T G A G T C A G C T A G C T C G A T G C A T T C A G A G C T G T A C A C G T
A C G T A C G T A C G T A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:10
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:GGCTTTTGTC--
-----NTGTCAN
 C T A G A C T G A G T C A G C T A G C T C G A T G C A T T C A G A G C T G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A