Information for 6-GGGCAGAGCT (Motif 19)

T A C G C T A G C T A G A G T C C T G A A T C G C G T A A T C G A G T C A G C T
Reverse Opposite:
T C G A C T A G A T G C G C A T A T G C G A C T T C A G G A T C A G T C A T G C
p-value:1e-6
log p-value:-1.550e+01
Information Content per bp:1.815
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif4.73%
Number of Background Sequences with motif744.1
Percentage of Background Sequences with motif1.51%
Average Position of motif in Targets53.5 +/- 28.5bp
Average Position of motif in Background47.9 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:1
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---GGGCAGAGCT
RGKGGGCGGAGC-
 A C G T A C G T A C G T T A C G C T A G C T A G A G T C C T G A A T C G C G T A A T C G A G T C A G C T
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---GGGCAGAGCT-
AGGGGGCGGGGCTG
 A C G T A C G T A C G T T A C G C T A G C T A G A G T C C T G A A T C G C G T A A T C G A G T C A G C T A C G T
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

THAP1/MA0597.1/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GGGCAGAGCT
TNNGGGCAG----
 A C G T A C G T A C G T T A C G C T A G C T A G A G T C C T G A A T C G C G T A A T C G A G T C A G C T
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GGGCAGAGCT
GGGGGCGGGGCC
 A C G T A C G T T A C G C T A G C T A G A G T C C T G A A T C G C G T A A T C G A G T C A G C T
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GGGCAGAGCT--
TAGGGCAAAGGTCA
 A C G T A C G T T A C G C T A G C T A G A G T C C T G A A T C G C G T A A T C G A G T C A G C T A C G T A C G T
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GGGCAGAGCT--
GTAGGGCAAAGGTCA
 A C G T A C G T A C G T T A C G C T A G C T A G A G T C C T G A A T C G C G T A A T C G A G T C A G C T A C G T A C G T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

NR2C2/MA0504.1/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GGGCAGAGCT--
AGGGGTCAGAGGTCA
 A C G T A C G T A C G T T A C G C T A G C T A G A G T C C T G A A T C G C G T A A T C G A G T C A G C T A C G T A C G T
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:8
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GGGCAGAGCT-
NNVDGGGYGGGGCYN
 A C G T A C G T A C G T A C G T T A C G C T A G C T A G A G T C C T G A A T C G C G T A A T C G A G T C A G C T A C G T
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GGGCAGAGCT--
TGGGGCAAAGGTCA
 A C G T A C G T T A C G C T A G C T A G A G T C C T G A A T C G C G T A A T C G A G T C A G C T A C G T A C G T
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

PB0133.1_Hic1_2/Jaspar

Match Rank:10
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------GGGCAGAGCT
NNNNTTGGGCACNNCN
 A C G T A C G T A C G T A C G T A C G T A C G T T A C G C T A G C T A G A G T C C T G A A T C G C G T A A T C G A G T C A G C T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C