Information for 3-TTTGAYTGCC (Motif 18)

C G A T A C G T A C G T C T A G C T G A G A T C A G C T A C T G G T A C A G T C
Reverse Opposite:
T C A G C A T G A G T C C T G A C T A G A G C T G A T C C G T A G T C A G C T A
p-value:1e-7
log p-value:-1.768e+01
Information Content per bp:1.715
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif4.90%
Number of Background Sequences with motif711.3
Percentage of Background Sequences with motif1.44%
Average Position of motif in Targets47.7 +/- 25.8bp
Average Position of motif in Background51.0 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dux/MA0611.1/Jaspar

Match Rank:1
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:TTTGAYTGCC
-TTGATTGN-
 C G A T A C G T A C G T C T A G C T G A G A T C A G C T A C T G G T A C A G T C
A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:2
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:TTTGAYTGCC---
-BTGABTGACAGS
 C G A T A C G T A C G T C T A G C T G A G A T C A G C T A C T G G T A C A G T C A C G T A C G T A C G T
A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

Hmx1/MA0896.1/Jaspar

Match Rank:3
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----TTTGAYTGCC---
ANNCATTAATTGCTNGN
 A C G T A C G T A C G T A C G T C G A T A C G T A C G T C T A G C T G A G A T C A G C T A C T G G T A C A G T C A C G T A C G T A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:4
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----TTTGAYTGCC---
ANNCATTAATTGCTNGN
 A C G T A C G T A C G T A C G T C G A T A C G T A C G T C T A G C T G A G A T C A G C T A C T G G T A C A G T C A C G T A C G T A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TTTGAYTGCC---
-NTGATTGACAGN
 C G A T A C G T A C G T C T A G C T G A G A T C A G C T A C T G G T A C A G T C A C G T A C G T A C G T
A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

PBX1/MA0070.1/Jaspar

Match Rank:6
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TTTGAYTGCC--
TTTGATTGATGN
 C G A T A C G T A C G T C T A G C T G A G A T C A G C T A C T G G T A C A G T C A C G T A C G T
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:7
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TTTGAYTGCC
TTTAATTGCN
 C G A T A C G T A C G T C T A G C T G A G A T C A G C T A C T G G T A C A G T C
C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C

Hoxd9/MA0913.1/Jaspar

Match Rank:8
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TTTGAYTGCC
TTTTTATTGC-
 A C G T C G A T A C G T A C G T C T A G C T G A G A T C A G C T A C T G G T A C A G T C
C G A T G C A T C A G T C G A T C G A T C G T A G A C T A C G T C T A G A G T C A C G T

Hmx3/MA0898.1/Jaspar

Match Rank:9
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----TTTGAYTGCC---
ATTNNTTAATTGCTTGT
 A C G T A C G T A C G T A C G T C G A T A C G T A C G T C T A G C T G A G A T C A G C T A C T G G T A C A G T C A C G T A C G T A C G T
G C T A G C A T A G C T A G T C C G A T G C A T G C A T C T G A C G T A C A G T G A C T C T A G G A T C A G C T A C G T T A C G A C G T

PH0043.1_Hmx3/Jaspar

Match Rank:10
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----TTTGAYTGCC---
ATTNNTTAATTGCTTGT
 A C G T A C G T A C G T A C G T C G A T A C G T A C G T C T A G C T G A G A T C A G C T A C T G G T A C A G T C A C G T A C G T A C G T
G C T A G C A T A G C T A G T C C G A T G C A T G C A T C T G A C G T A C A G T G A C T C T A G G A T C A G C T A C G T T A C G A C G T