Information for 2-GATTGGTAGG (Motif 6)

A T C G G C T A A G C T A C G T A C T G C T A G A C G T C G T A A C T G A C T G
Reverse Opposite:
G T A C A G T C C G A T C G T A A G T C A G T C G T C A T C G A C G A T A T G C
p-value:1e-11
log p-value:-2.634e+01
Information Content per bp:1.852
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.87%
Number of Background Sequences with motif51.3
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets47.9 +/- 26.6bp
Average Position of motif in Background54.5 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYB/MA0502.1/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GATTGGTAGG---
CTGATTGGTCNATTT
 A C G T A C G T A T C G G C T A A G C T A C G T A C T G C T A G A C G T C G T A A C T G A C T G A C G T A C G T A C G T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

NFYA/MA0060.2/Jaspar

Match Rank:2
Score:0.65
Offset:-8
Orientation:forward strand
Alignment:--------GATTGGTAGG
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G G C T A A G C T A C G T A C T G C T A G A C G T C G T A A C T G A C T G
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

PBX1/MA0070.1/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GATTGGTAGG
TTTGATTGATGN-
 A C G T A C G T A C G T A T C G G C T A A G C T A C G T A C T G C T A G A C G T C G T A A C T G A C T G
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GATTGGTAGG
NTGATTGACAGN
 A C G T A C G T A T C G G C T A A G C T A C G T A C T G C T A G A C G T C G T A A C T G A C T G
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

POL004.1_CCAAT-box/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GATTGGTAGG-
TGATTGGCTANN
 A C G T A T C G G C T A A G C T A C G T A C T G C T A G A C G T C G T A A C T G A C T G A C G T
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

Dux/MA0611.1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GATTGGTAGG
TTGATTGN----
 A C G T A C G T A T C G G C T A A G C T A C G T A C T G C T A G A C G T C G T A A C T G A C T G
G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GATTGGTAGG
BTGABTGACAGS
 A C G T A C G T A T C G G C T A A G C T A C G T A C T G C T A G A C G T C G T A A C T G A C T G
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

Sox5/MA0087.1/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GATTGGTAGG
-ATTGTTA--
 A T C G G C T A A G C T A C G T A C T G C T A G A C G T C G T A A C T G A C T G
A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GATTGGTAGG
CCGATTGGCT--
 A C G T A C G T A T C G G C T A A G C T A C G T A C T G C T A G A C G T C G T A A C T G A C T G
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GATTGGTAGG-
TGAGTGACAGSC
 A C G T A T C G G C T A A G C T A C G T A C T G C T A G A C G T C G T A A C T G A C T G A C G T
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C