Information for 3-GGRGARGRAGGCAGAG (Motif 5)

T A C G C T A G C T G A T C A G C T G A C T A G C T A G T C G A C G T A A C T G A C T G A T G C C G T A A T C G C T G A C T A G
Reverse Opposite:
A G T C A G C T A T G C A C G T A T C G A G T C A G T C C G A T A G C T G A T C A G T C A G C T A G T C G A C T A G T C A T G C
p-value:1e-12
log p-value:-2.887e+01
Information Content per bp:1.716
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif3.16%
Number of Background Sequences with motif178.2
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets44.2 +/- 26.8bp
Average Position of motif in Background50.2 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0029.1_Hic1_1/Jaspar

Match Rank:1
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GGRGARGRAGGCAGAG-
-NGTAGGTTGGCATNNN
 T A C G C T A G C T G A T C A G C T G A C T A G C T A G T C G A C G T A A C T G A C T G A T G C C G T A A T C G C T G A C T A G A C G T
A C G T C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGRGARGRAGGCAGAG
AAGGKGRCGCAGGCA---
 A C G T A C G T T A C G C T A G C T G A T C A G C T G A C T A G C T A G T C G A C G T A A C T G A C T G A T G C C G T A A T C G C T G A C T A G
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.57
Offset:6
Orientation:forward strand
Alignment:GGRGARGRAGGCAGAG
------CCAGGAACAG
 T A C G C T A G C T G A T C A G C T G A C T A G C T A G T C G A C G T A A C T G A C T G A T G C C G T A A T C G C T G A C T A G
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

Hic1/MA0739.1/Jaspar

Match Rank:4
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:GGRGARGRAGGCAGAG
-----GGTTGGCAT--
 T A C G C T A G C T G A T C A G C T G A C T A G C T A G T C G A C G T A A C T G A C T G A T G C C G T A A T C G C T G A C T A G
A C G T A C G T A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.55
Offset:7
Orientation:forward strand
Alignment:GGRGARGRAGGCAGAG-
-------GAGSCCGAGC
 T A C G C T A G C T G A T C A G C T G A C T A G C T A G T C G A C G T A A C T G A C T G A T G C C G T A A T C G C T G A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.54
Offset:-8
Orientation:forward strand
Alignment:--------GGRGARGRAGGCAGAG
SMCAGTCWGAKGGAGGAGGC----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C T A G C T G A T C A G C T G A C T A G C T A G T C G A C G T A A C T G A C T G A T G C C G T A A T C G C T G A C T A G
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C A C G T A C G T A C G T A C G T

ZNF263/MA0528.1/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GGRGARGRAGGCAGAG--------
---GGAGGAGGAGGGGGAGGAGGA
 T A C G C T A G C T G A T C A G C T G A C T A G C T A G T C G A C G T A A C T G A C T G A T G C C G T A A T C G C T G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C T A G C T G A C A T G T A C G G C T A C A T G T C A G T C G A T C A G C T A G C T A G C T A G T C A G C T G A C T A G C T A G C T G A C T A G C T A G C T G A

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:GGRGARGRAGGCAGAG----------
------YCAGGCWCAGTACCAGGCTC
 T A C G C T A G C T G A T C A G C T G A C T A G C T A G T C G A C G T A A C T G A C T G A T G C C G T A A T C G C T G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

HIC2/MA0738.1/Jaspar

Match Rank:9
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GGRGARGRAGGCAGAG
-----NGTGGGCAT--
 T A C G C T A G C T G A T C A G C T G A C T A G C T A G T C G A C G T A A C T G A C T G A T G C C G T A A T C G C T G A C T A G
A C G T A C G T A C G T A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:10
Score:0.53
Offset:5
Orientation:forward strand
Alignment:GGRGARGRAGGCAGAG-
-----RGKGGGCGGAGC
 T A C G C T A G C T G A T C A G C T G A C T A G C T A G T C G A C G T A A C T G A C T G A T G C C G T A A T C G C T G A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C