Information for 19-GAGCTCAGCT (Motif 48)

A T C G T G C A T A C G A T G C G A C T T G A C C G T A A C T G A G T C C G A T
Reverse Opposite:
C G T A T C A G A G T C C G A T A C T G C T G A A T C G A T G C A C G T T A G C
p-value:1e-5
log p-value:-1.212e+01
Information Content per bp:1.683
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif6.03%
Number of Background Sequences with motif1257.4
Percentage of Background Sequences with motif2.82%
Average Position of motif in Targets53.2 +/- 23.2bp
Average Position of motif in Background50.2 +/- 33.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:1
Score:0.72
Offset:2
Orientation:forward strand
Alignment:GAGCTCAGCT--
--NAHCAGCTGD
 A T C G T G C A T A C G A T G C G A C T T G A C C G T A A C T G A G T C C G A T A C G T A C G T
A C G T A C G T G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:2
Score:0.69
Offset:5
Orientation:reverse strand
Alignment:GAGCTCAGCT---
-----CAGCTGTT
 A T C G T G C A T A C G A T G C G A C T T G A C C G T A A C T G A G T C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.68
Offset:5
Orientation:forward strand
Alignment:GAGCTCAGCT
-----CAGCC
 A T C G T G C A T A C G A T G C G A C T T G A C C G T A A C T G A G T C C G A T
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

TFAP4/MA0691.1/Jaspar

Match Rank:4
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GAGCTCAGCT---
---ATCAGCTGTT
 A T C G T G C A T A C G A T G C G A C T T G A C C G T A A C T G A G T C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A G C A T A T G C C G T A A T C G T A G C A C G T A C T G C G A T A C G T

Myog/MA0500.1/Jaspar

Match Rank:5
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GAGCTCAGCT---
--NNGCAGCTGTC
 A T C G T G C A T A C G A T G C G A C T T G A C C G T A A C T G A G T C C G A T A C G T A C G T A C G T
A C G T A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:6
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:GAGCTCAGCT----
----CCAGCTGTTN
 A T C G T G C A T A C G A T G C G A C T T G A C C G T A A C T G A G T C C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

NHLH1/MA0048.2/Jaspar

Match Rank:7
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GAGCTCAGCT---
---CGCAGCTGCG
 A T C G T G C A T A C G A T G C G A C T T G A C C G T A A C T G A G T C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.65
Offset:4
Orientation:forward strand
Alignment:GAGCTCAGCT----
----NCAGCTGCTG
 A T C G T G C A T A C G A T G C G A C T T G A C C G T A A C T G A G T C C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:9
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:GAGCTCAGCT----
----ACAGCTGTTV
 A T C G T G C A T A C G A T G C G A C T T G A C C G T A A C T G A G T C C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A G T C C G T A T A C G A T G C A C G T A C T G A G C T A G C T T G C A

NRL/MA0842.1/Jaspar

Match Rank:10
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GAGCTCAGCT----
---GTCAGCANNTN
 A T C G T G C A T A C G A T G C G A C T T G A C C G T A A C T G A G T C C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T