Information for 1-AGGCCTTTCTCAC (Motif 4)

C G T A A T C G C T A G A G T C T A G C C G A T G A C T A G C T A G T C A G C T G A T C G T C A A G T C
Reverse Opposite:
A C T G C A G T C A T G C T G A A C T G C T G A C G T A C G T A A T C G A C T G A G T C A T G C C G A T
p-value:1e-13
log p-value:-3.065e+01
Information Content per bp:1.792
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.87%
Number of Background Sequences with motif36.3
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets48.5 +/- 21.8bp
Average Position of motif in Background57.8 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--AGGCCTTTCTCAC
CNAGGCCT-------
 A C G T A C G T C G T A A T C G C T A G A G T C T A G C C G A T G A C T A G C T A G T C A G C T G A T C G T C A A G T C
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AGGCCTTTCTCAC
NNGCACCTTTCTCC-
 A C G T A C G T C G T A A T C G C T A G A G T C T A G C C G A T G A C T A G C T A G T C A G C T G A T C G T C A A G T C
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AGGCCTTTCTCAC
CTAGGCCT-------
 A C G T A C G T C G T A A T C G C T A G A G T C T A G C C G A T G A C T A G C T A G T C A G C T G A T C G T C A A G T C
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.58
Offset:4
Orientation:forward strand
Alignment:AGGCCTTTCTCAC-
----HTTTCCCASG
 C G T A A T C G C T A G A G T C T A G C C G A T G A C T A G C T A G T C A G C T G A T C G T C A A G T C A C G T
A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGGCCTTTCTCAC-
TGACCTTTGCCCCA
 C G T A A T C G C T A G A G T C T A G C C G A T G A C T A G C T A G T C A G C T G A T C G T C A A G T C A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

TBR1/MA0802.1/Jaspar

Match Rank:6
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:AGGCCTTTCTCAC--
-----TTTCACACCT
 C G T A A T C G C T A G A G T C T A G C C G A T G A C T A G C T A G T C A G C T G A T C G T C A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T

PB0180.1_Sp4_2/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AGGCCTTTCTCAC
CAAAGGCGTGGCCAG-
 A C G T A C G T A C G T C G T A A T C G C T A G A G T C T A G C C G A T G A C T A G C T A G T C A G C T G A T C G T C A A G T C
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G A C G T

Zfx/MA0146.2/Jaspar

Match Rank:8
Score:0.54
Offset:-7
Orientation:forward strand
Alignment:-------AGGCCTTTCTCAC
GGGGCCGAGGCCTG------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T C G C T A G A G T C T A G C C G A T G A C T A G C T A G T C A G C T G A T C G T C A A G T C
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGGCCTTTCTCAC--
TGACCTTTGCCCTAN
 C G T A A T C G C T A G A G T C T A G C C G A T G A C T A G C T A G T C A G C T G A T C G T C A A G T C A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----AGGCCTTTCTCAC
AGGGAAGTCATTTCT---
 A C G T A C G T A C G T A C G T A C G T C G T A A T C G C T A G A G T C T A G C C G A T G A C T A G C T A G T C A G C T G A T C G T C A A G T C
C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T A C G T A C G T A C G T