Information for 13-GCCTTGYGTT (Motif 34)

A C T G A T G C T A G C C A G T A C G T C T A G A G T C T C A G C G A T A G C T
Reverse Opposite:
C T G A G C T A A G T C C T A G G A T C G T C A G T C A A T C G A T C G T G A C
p-value:1e-7
log p-value:-1.795e+01
Information Content per bp:1.765
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.87%
Number of Background Sequences with motif266.9
Percentage of Background Sequences with motif0.60%
Average Position of motif in Targets49.9 +/- 24.2bp
Average Position of motif in Background52.4 +/- 33.9bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GCCTTGYGTT
BNTGDCCTTG----
 A C G T A C G T A C G T A C G T A C T G A T G C T A G C C A G T A C G T C T A G A G T C T C A G C G A T A G C T
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCCTTGYGTT
AGGCCTAG----
 A C G T A C G T A C T G A T G C T A G C C A G T A C G T C T A G A G T C T C A G C G A T A G C T
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCCTTGYGTT
RCCATMTGTT
 A C T G A T G C T A G C C A G T A C G T C T A G A G T C T C A G C G A T A G C T
C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T

Myc/MA0147.2/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCCTTGYGTT-
-CCATGTGCTT
 A C T G A T G C T A G C C A G T A C G T C T A G A G T C T C A G C G A T A G C T A C G T
A C G T T G A C A G T C C G T A A G C T A C T G A C G T A C T G A T G C G A C T A G C T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCCTTGYGTT
AGGCCTNG----
 A C G T A C G T A C T G A T G C T A G C C A G T A C G T C T A G A G T C T C A G C G A T A G C T
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCCTTGYGTT
GCCATCTGTT
 A C T G A T G C T A G C C A G T A C G T C T A G A G T C T C A G C G A T A G C T
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

Twist2/MA0633.1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCCTTGYGTT
ACCATATGTT
 A C T G A T G C T A G C C A G T A C G T C T A G A G T C T C A G C G A T A G C T
C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GCCTTGYGTT
TGACCTTGAN--
 A C G T A C G T A C T G A T G C T A G C C A G T A C G T C T A G A G T C T C A G C G A T A G C T
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T

NEUROD2/MA0668.1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCCTTGYGTT
GCCATATGGT
 A C T G A T G C T A G C C A G T A C G T C T A G A G T C T C A G C G A T A G C T
T C A G T G A C A T G C C T G A A G C T T G C A A G C T A C T G A C T G G A C T

Nr5a2/MA0505.1/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GCCTTGYGTT-
GCTGACCTTGAACTN
 A C G T A C G T A C G T A C G T A C T G A T G C T A G C C A G T A C G T C T A G A G T C T C A G C G A T A G C T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T