Information for 10-CACGTCCTTG (Motif 31)

A G T C C T G A G T A C A T C G C G A T G A T C A G T C A C G T A C G T A T C G
Reverse Opposite:
A T G C G T C A C G T A A C T G C A T G C G T A A T G C C A T G G A C T A C T G
p-value:1e-8
log p-value:-1.953e+01
Information Content per bp:1.838
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.01%
Number of Background Sequences with motif108.1
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets44.9 +/- 28.5bp
Average Position of motif in Background54.5 +/- 40.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:CACGTCCTTG
BNTGDCCTTG
 A G T C C T G A G T A C A T C G C G A T G A T C A G T C A C G T A C G T A T C G
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CACGTCCTTG
GCACGTNC---
 A C G T A G T C C T G A G T A C A T C G C G A T G A T C A G T C A C G T A C G T A T C G
A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:3
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CACGTCCTTG--
--TGACCTTGAN
 A G T C C T G A G T A C A T C G C G A T G A T C A G T C A C G T A C G T A T C G A C G T A C G T
A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

PB0014.1_Esrra_1/Jaspar

Match Rank:4
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CACGTCCTTG----
NNNNATGACCTTGANTN
 A C G T A C G T A C G T A G T C C T G A G T A C A T C G C G A T G A T C A G T C A C G T A C G T A T C G A C G T A C G T A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:5
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CACGTCCTTG--
--TGACCTTGAV
 A G T C C T G A G T A C A T C G C G A T G A T C A G T C A C G T A C G T A T C G A C G T A C G T
A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:6
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CACGTCCTTG
GCACGTACCC-
 A C G T A G T C C T G A G T A C A T C G C G A T G A T C A G T C A C G T A C G T A T C G
C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:7
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CACGTCCTTG
GCACGTAY---
 A C G T A G T C C T G A G T A C A T C G C G A T G A T C A G T C A C G T A C G T A T C G
C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T A C G T A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:8
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CACGTCCTTG
ACCACATCCTGT
 A C G T A C G T A G T C C T G A G T A C A T C G C G A T G A T C A G T C A C G T A C G T A T C G
T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CACGTCCTTG-
-ATGACCTTGA
 A G T C C T G A G T A C A T C G C G A T G A T C A G T C A C G T A C G T A T C G A C G T
A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

Esrra/MA0592.2/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CACGTCCTTG--
-ATGACCTTGAA
 A G T C C T G A G T A C A T C G C G A T G A T C A G T C A C G T A C G T A T C G A C G T A C G T
A C G T C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A